PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.A01074.1.p | ||||||||
Common Name | MIMGU_mgv1a023768mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | ERF | ||||||||
Protein Properties | Length: 231aa MW: 25606.8 Da PI: 4.9469 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 38.3 | 3.3e-12 | 15 | 55 | 1 | 46 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaa 46 ++y GVr k++ ++ AeIrd+++ +kr++lg+f t+eeA + Migut.A01074.1.p 15 TKYVGVR--KRNSKYTAEIRDFRK---KKRVWLGTFNTPEEASFVY 55 69****7..5567********843...6**************8665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 3.13E-13 | 15 | 55 | No hit | No description |
Pfam | PF00847 | 7.7E-6 | 15 | 51 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 12.023 | 16 | 75 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.4E-13 | 16 | 68 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.2E-10 | 16 | 62 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.2E-6 | 16 | 81 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence Send to blast |
MADLKKEERR VSLETKYVGV RKRNSKYTAE IRDFRKKKRV WLGTFNTPEE ASFVYLSKKR 60 EIDESKSKLL AKNIPSQNPS ETLDSPSHVL HKRQVSDKNG VSDGTSSRSA AALEEQVSDK 120 NEDSDETRSR STAPVEEQVF GKNEVSSDEI SRRSTAALEE QVSDKNEVSD ETSSRSAATM 180 EEQVSDKNEV SDGTNSRSAA PVEEKVSDKN DVSDETSSRS AAAMEEKVYG * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 20 | 38 | RKRNSKYTAEIRDFRKKKR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.A01074.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012858904.1 | 1e-163 | PREDICTED: ethylene-responsive transcription factor WIN1-like | ||||
TrEMBL | A0A022PXA0 | 1e-159 | A0A022PXA0_ERYGU; Uncharacterized protein (Fragment) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28360.1 | 3e-13 | ERF domain protein 12 |
Link Out ? help Back to Top | |
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Phytozome | Migut.A01074.1.p |