PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A00921.1.p
Common NameMIMGU_mgv1a019138mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 275aa    MW: 28904.4 Da    PI: 5.3464
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A00921.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2507.4e-16104152255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        y+G+r  +++g+Wv+eIr+p++   ++r++lg++ ++e+Aa+a++ a+++l+g
  Migut.A00921.1.p 104 VYRGIR--SRSGKWVSEIREPKK---TTRIWLGTYPSPEMAAAAYDVAALALKG 152
                       59***6..678*********854...5***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103219.928104160IPR001471AP2/ERF domain
SMARTSM003805.1E-26104166IPR001471AP2/ERF domain
PfamPF008476.1E-9104152IPR001471AP2/ERF domain
SuperFamilySSF541715.36E-17104161IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.1E-25104161IPR001471AP2/ERF domain
CDDcd000181.21E-15105161No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MADSPPHLNM SQQDHPPSPT ENPLSPPPSP PPSPPPPPPP SILPPPRSLL PAEAMVQQSR  60
DQSQHLQPSI SSETLPSPKK VKKTAAGTST SATRPAAGAG KHAVYRGIRS RSGKWVSEIR  120
EPKKTTRIWL GTYPSPEMAA AAYDVAALAL KGGDTLLNFP DRASRYPTPD SPSPQDIRRA  180
AAAAAAMMKP ESGGDEAPPE AAAAAAGGEP PPNAEALTTG HDQFVDEEAL FHMPNLLLSM  240
AEGMLVSPPR MGSRPLDDSP ENSDAESLWS YSFD*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00558DAPTransfer from AT5G52020Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.A00921.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835460.10.0PREDICTED: ethylene-responsive transcription factor ERF025-like
SwissprotQ9FJ904e-54ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A022RGU60.0A0A022RGU6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.16e-43ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]