PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A00920.1.p
Common NameLOC105956171, MIMGU_mgv1a025975mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 208aa    MW: 23080.8 Da    PI: 4.9241
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A00920.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.6e-183989155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                      + y+GVr++  + +Wv+e+r+p     +  kr++lg++ t+e+Aa+a++ a+++l+g
  Migut.A00920.1.p 39 PVYRGVRRRN-SDKWVCELREP-----TaqKRVWLGTYPTPEMAARAHDVAALALRG 89
                      68*****888.8*********9.....446*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.2E-133989IPR001471AP2/ERF domain
PROSITE profilePS5103221.7734097IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-204099IPR016177DNA-binding domain
SMARTSM003801.2E-2540103IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-294099IPR001471AP2/ERF domain
PRINTSPR003672.0E-74152IPR001471AP2/ERF domain
CDDcd000181.00E-254199No hitNo description
PRINTSPR003672.0E-76379IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MEYSPVHSNC SDEEEVLNLA AANPKKRAGR KKFKETRHPV YRGVRRRNSD KWVCELREPT  60
AQKRVWLGTY PTPEMAARAH DVAALALRGK AACLNFADSV WRLPVPASKD ARDLRKAAVE  120
AAEAFRPPES GEEFCSEQRR SEEVAADSTN GGGNVAGGVS DLYDVVLEDL DMERLAEGVL  180
LSPPPCLGWR FSWDDVESDA DMELWSF*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates cold or dehydration-inducible transcription. CBF/DREB1 factors play a key role in freezing tolerance and cold acclimation. {ECO:0000269|PubMed:11798174}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.A00920.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835461.11e-150PREDICTED: dehydration-responsive element-binding protein 1E-like
SwissprotQ9SGJ62e-59DRE1E_ARATH; Dehydration-responsive element-binding protein 1E
TrEMBLA0A022RG741e-149A0A022RG74_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26324183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63030.22e-51ERF family protein