PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A00800.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 545aa    MW: 60900.6 Da    PI: 8.8521
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A00800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding521.6e-1660103448
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       WT eEd+ll ++v+++ g++Wk+Ia++m   Rt+ qc +rwqk+l
  Migut.A00800.1.p  60 WTIEEDKLLTELVQRFNGRNWKKIAEYMS-ERTDVQCLHRWQKVL 103
                       *****************************.************986 PP
2Myb_DNA-binding582.2e-18109155148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       + +WT+eEd+++ ++v+++G++ W++Ia+ ++ gR +kqc++rw+++l
  Migut.A00800.1.p 109 KSPWTKEEDDRITELVAEFGSKKWAAIAKFLP-GRIGKQCRERWHNHL 155
                       679*****************************.*************97 PP
3Myb_DNA-binding53.17.2e-17161203145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       +++WT+eE+ +l ++++ lG++ W+ Ia++++ gRt++ +k++w+
  Migut.A00800.1.p 161 KDPWTKEEEAILTHYHQVLGNK-WAEIAKYLP-GRTDNAIKNHWH 203
                       689*******************.*********.***********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.26450103IPR017930Myb domain
SMARTSM007172.5E-1156105IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.8E-2259119IPR009057Homeodomain-like
SuperFamilySSF466896.75E-1659113IPR009057Homeodomain-like
PfamPF002492.9E-1460103IPR001005SANT/Myb domain
CDDcd001678.08E-1260103No hitNo description
PROSITE profilePS5129428.972104159IPR017930Myb domain
SuperFamilySSF466893.74E-32106202IPR009057Homeodomain-like
SMARTSM007171.0E-16108157IPR001005SANT/Myb domain
PfamPF002491.7E-17109155IPR001005SANT/Myb domain
CDDcd001673.46E-15111155No hitNo description
Gene3DG3DSA:1.10.10.607.2E-27120162IPR009057Homeodomain-like
PROSITE profilePS5129419.057160210IPR017930Myb domain
SMARTSM007171.1E-15160208IPR001005SANT/Myb domain
PfamPF002499.7E-15161203IPR001005SANT/Myb domain
CDDcd001679.35E-12163203No hitNo description
Gene3DG3DSA:1.10.10.602.0E-21163208IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 545 aa     Download sequence    Send to blast
MVHVKKEICT PESAKEVTFV SYSSFSESSS DIVTPRCSSD SGLSVHRRTG PARRSSQAGW  60
TIEEDKLLTE LVQRFNGRNW KKIAEYMSER TDVQCLHRWQ KVLDPGLVKS PWTKEEDDRI  120
TELVAEFGSK KWAAIAKFLP GRIGKQCRER WHNHLDPAIR KDPWTKEEEA ILTHYHQVLG  180
NKWAEIAKYL PGRTDNAIKN HWHCSVKKRP DLNLPRVSAP ELQGNTSVHI CKAEEKVQPK  240
RSAQKRVPQN TGGTCSTNFA NFFGENFETK PVFLGIGRSS EGVRNLIEHP NQNQCDRSSL  300
ITSHSYTKPK TNSLNNTMDP CFYVKTGHAN LDVPPITHAR TLDSPNRSRY NPCGNDDMSD  360
CSPIGTLLSL SLCGSTDESQ RAGKRLKFYE PSQLTPLDVK NVNKNNELAN SYPSSNLSLS  420
ISSNDCSPEL MLKTSAMSYR NTPSIIRKKF VTEAEQAIDF SSLSTPPSVI SLQRASGGED  480
VNALSLMSEK SCLHSKLTSS ISGQPLERRL EYAFDLEWDS ATGRRCTPGS KSGAKFDAKM  540
MLTP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C6e-63602099158MYB PROTO-ONCOGENE PROTEIN
1h89_C6e-63602099158MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.A00800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012846545.10.0PREDICTED: myb-like protein M
TrEMBLA0A022QR210.0A0A022QR21_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA103932025
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11510.24e-79myb domain protein 3r-4