PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A00686.1.p
Common NameLOC105973825, MIMGU_mgv1a023604mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 347aa    MW: 37670.4 Da    PI: 4.8705
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A00686.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.8e-19133183155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       ++++GVr+++ +g+W+AeIrdp     r  r +lg++ taeeAa  +++a+ +l+g
  Migut.A00686.1.p 133 KKFRGVRQRP-WGKWAAEIRDPQ----RrVRLWLGTYETAEEAAMVYDHAAIQLRG 183
                       59********.**********93....35*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.93E-31133190No hitNo description
PfamPF008473.2E-12134183IPR001471AP2/ERF domain
SuperFamilySSF541713.01E-21134191IPR016177DNA-binding domain
PROSITE profilePS5103223.762134191IPR001471AP2/ERF domain
SMARTSM003801.9E-37134197IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.7E-30134191IPR001471AP2/ERF domain
PRINTSPR003675.0E-10135146IPR001471AP2/ERF domain
PRINTSPR003675.0E-10157173IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MLSGTRVKYT EHVSHTTVVA RPEYSISGRK SFFPAEIPAR TVRISVTDGD ATDSSGDEED  60
AFSGKRQRVR RFINEVRIQP CTKDGGGAVA TTSASAAAAA KSSRPSSVSL LKRKKSGGGG  120
KAESKVPKSV TVKKFRGVRQ RPWGKWAAEI RDPQRRVRLW LGTYETAEEA AMVYDHAAIQ  180
LRGPDALTNF SNPPSKDNKT SSEYNSDEES HNNAKSPKSV LRFVSAADSQ AETEVEAEAE  240
AESSSVFFPS SDNAVAGKES DDRSLSDFPI FPPNDDLFTE LNSVPVPDLF AETGFSDNIF  300
GFDYYCSNDM LIGSSTDFGF GSPSWQTDDF FQDCCDLFGS DPLVAL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-19133190462ATERF1
3gcc_A1e-19133190462ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.A00686.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854331.10.0PREDICTED: ethylene-responsive transcription factor CRF1
TrEMBLA0A022Q6Z10.0A0A022Q6Z1_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49423126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.23e-51cytokinin response factor 2