PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.A00486.1.p | ||||||||
Common Name | LOC105957907, MIMGU_mgv1a002385mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | BES1 | ||||||||
Protein Properties | Length: 682aa MW: 76941.3 Da PI: 6.5494 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 135.4 | 5.9e-42 | 68 | 185 | 3 | 119 |
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 + rk+++kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+V++AL+re Gw+v++DGttyr++s + ++ + +++s+++++s Migut.A00486.1.p 68 KSRKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVIAALARESGWTVDHDGTTYRHSSPSPMQPPPIAHFNSVQQNNSNV 160 789*****************************************************************6654444444555555555544433 PP DUF822 96 .sslkssalaspvesysaspksssf 119 ++ l+ + s spk+ s+ Migut.A00486.1.p 161 pNVGAHPVLSGESPLFSGSPKNCSM 185 1222222222223333333333333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 9.1E-44 | 68 | 228 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
SuperFamily | SSF51445 | 3.52E-155 | 244 | 678 | IPR017853 | Glycoside hydrolase superfamily |
Gene3D | G3DSA:3.20.20.80 | 2.0E-167 | 247 | 678 | IPR013781 | Glycoside hydrolase, catalytic domain |
Pfam | PF01373 | 4.7E-80 | 269 | 640 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.2E-53 | 284 | 298 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.2E-53 | 305 | 323 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.2E-53 | 327 | 348 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.2E-53 | 420 | 442 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.2E-53 | 493 | 512 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.2E-53 | 527 | 543 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.2E-53 | 544 | 555 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.2E-53 | 562 | 585 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.2E-53 | 600 | 622 | IPR001554 | Glycoside hydrolase, family 14 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000272 | Biological Process | polysaccharide catabolic process | ||||
GO:0048831 | Biological Process | regulation of shoot system development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0016161 | Molecular Function | beta-amylase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 682 aa Download sequence Send to blast |
MNTNTTMNHR FAAAAEDLDV HESPAPPTTT STHPFQPQPQ RRPRGFAATN SNNNNTTATT 60 TSGGTPTKSR KEREKEKERT KLRERHRRAI TSRMLAGLRQ YGNFPLPARA DMNDVIAALA 120 RESGWTVDHD GTTYRHSSPS PMQPPPIAHF NSVQQNNSNV PNVGAHPVLS GESPLFSGSP 180 KNCSMRSALD CQPSALRLDE NLSPASLDSV VPDRDGKVDK YSITSAINSS ECLDPDQFVH 240 ANGISGTSYI PVYVRLSTGL INNFCQLMDP EGVKEELQHL KSLRVDGVVV DCWWGIVEAW 300 SPKKYEWAGY RELFNIIREF GMKLQVVMAF HEYGGNDSGG IFISLPQWVL EIGKSNQDIF 360 FTDREGRRNT ECLSWGIDKE RVLRGRTGVE MYFDFMRSFR TEFDDLFTEG LISGVEIGLG 420 VCGELKYPSF SERMGWKYPG IGEFQCYDKY LLQNLEKAAK LRGNPFWARG PENAGHYNSK 480 PHETGFFCER GDYDSYYGRF FMNWYTQILI DHADNVLSLA SLAFEETLIL VKIPSVYWWY 540 KTTSHAAELT AGYYNPSNQD GYSRLFEVLK KHQVTMKFVI SGLHAPYQEI DGAFSDSEGL 600 NWQVLNSAWD QGLSVAGQNL QPCYDREGLV RLVETAKPRN HPDSRHFSFF VFQQPSPLIQ 660 RTICLSEIDH FIKSMHGEVS S* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wdq_A | 1e-121 | 248 | 678 | 10 | 444 | Beta-amylase |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00543 | DAP | Transfer from AT5G45300 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.A00486.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012837341.1 | 0.0 | PREDICTED: beta-amylase 8 | ||||
Swissprot | Q9FH80 | 0.0 | BAM8_ARATH; Beta-amylase 8 | ||||
TrEMBL | A0A022RB37 | 0.0 | A0A022RB37_ERYGU; Beta-amylase | ||||
STRING | Migut.A00486.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1607 | 24 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45300.1 | 0.0 | beta-amylase 2 |
Link Out ? help Back to Top | |
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Phytozome | Migut.A00486.1.p |
Entrez Gene | 105957907 |
Publications ? help Back to Top | |||
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