PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.A00335.1.p | ||||||||
Common Name | MIMGU_mgv1a013791mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | WRKY | ||||||||
Protein Properties | Length: 211aa MW: 23417.3 Da PI: 6.6657 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.2 | 2e-29 | 71 | 129 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+ ++++ pr+YY+C + +Cpvkkkv+rsa+dp++++ +Yeg+Hnh+ Migut.A00335.1.p 71 KDGYQWRKYGQKVTRDNPSPRAYYKCYLSpNCPVKKKVQRSANDPSLLVAVYEGQHNHH 129 8*************************9888****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.5E-28 | 63 | 129 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 25.97 | 65 | 131 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.09E-25 | 67 | 130 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.4E-30 | 70 | 130 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.7E-24 | 71 | 129 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence Send to blast |
MQTDDLMEEL SRMKWENEKL NDMLQIKRKL ADEFQIDNFS NHGYCMPKEI KSNVSRVHVR 60 INPSDTNLVI KDGYQWRKYG QKVTRDNPSP RAYYKCYLSP NCPVKKKVQR SANDPSLLVA 120 VYEGQHNHHP TGGEISVAAA AGGGGSSSPG TTPASLDLTD PIICSRMQNA IAEKMVSSLT 180 RNDSFTAALA EAIAGRILND ESEDNYNDCF * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 6e-21 | 69 | 128 | 16 | 74 | Probable WRKY transcription factor 4 |
2lex_A | 6e-21 | 69 | 128 | 16 | 74 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Positively modulates defense-related gene expression and disease resistance. {ECO:0000269|PubMed:12068113}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.A00335.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid and pathogens. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:12068113}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011081961.1 | 4e-83 | probable WRKY transcription factor 40 | ||||
Swissprot | Q9C5T4 | 1e-50 | WRK18_ARATH; WRKY transcription factor 18 | ||||
TrEMBL | A0A022Q098 | 1e-158 | A0A022Q098_ERYGU; Uncharacterized protein | ||||
STRING | Migut.A00335.1.p | 1e-158 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4500 | 22 | 42 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31800.2 | 3e-49 | WRKY DNA-binding protein 18 |
Link Out ? help Back to Top | |
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Phytozome | Migut.A00335.1.p |