PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.A00324.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | CPP | ||||||||
Protein Properties | Length: 191aa MW: 21170.7 Da PI: 4.9252 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 21.4 | 5.1e-07 | 19 | 54 | 5 | 39 |
TCR 5 gCnCkkskClkkYCeCfaagkkCseeCkC.edCkNk 39 +C+C + kCl + C+C+ g+kCse C C +dC Nk Migut.A00324.1.p 19 RCTCVNKKCLIEVCSCYFLGEKCSEYCPCeQDCWNK 54 7****************************889**98 PP | |||||||
2 | TCR | 24.7 | 4.6e-08 | 114 | 151 | 5 | 42 |
TCR 5 gCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 gC C s+C+ + C Cf +++C+ +C C+ C N+ e+ Migut.A00324.1.p 114 GCMCIASRCMIQKCGCFGVREFCTPKCGCKRCINNVEN 151 8*********************************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM01114 | 0.024 | 15 | 57 | IPR033467 | Tesmin/TSO1-like CXC domain |
PROSITE profile | PS51634 | 11.589 | 16 | 150 | IPR005172 | CRC domain |
Pfam | PF03638 | 2.8E-4 | 19 | 54 | IPR005172 | CRC domain |
SMART | SM01114 | 0.0024 | 110 | 151 | IPR033467 | Tesmin/TSO1-like CXC domain |
Pfam | PF03638 | 1.2E-5 | 114 | 148 | IPR005172 | CRC domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence Send to blast |
MDDRNPPAGD NIIEIIAARC TCVNKKCLIE VCSCYFLGEK CSEYCPCEQD CWNKLYYDFL 60 PNREEIMENF IGEGSRTTQE NNNNNNNNRS SFSVAESSSN NTSSSEAGGG FSGGCMCIAS 120 RCMIQKCGCF GVREFCTPKC GCKRCINNVE NKDKVEQARN ERDTKGCRCT GDVHCTDSSK 180 CWCSGLVQYE * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.A00324.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012855838.1 | 1e-132 | PREDICTED: protein tesmin/TSO1-like CXC 8 | ||||
STRING | Migut.A00324.1.p | 1e-136 | (Erythranthe guttata) |
Link Out ? help Back to Top | |
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Phytozome | Migut.A00324.1.p |