PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A00232.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 976aa    MW: 108380 Da    PI: 4.9886
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A00232.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.71.2e-173783148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g WT+eEde+l  av+++ g++Wk+Ia+++   Rt+ qc +rwqk+l
  Migut.A00232.1.p 37 KGQWTAEEDEILRMAVQRFNGKNWKKIAECFK-DRTDVQCLHRWQKVL 83
                      799****************************9.************986 PP
2Myb_DNA-binding60.34.1e-1989135148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       +g+W++eEde ++++vk +G++ W+tIa+++  gR +kqc++rw+++l
  Migut.A00232.1.p  89 KGPWSKEEDEMIIELVKTYGPKKWSTIAQHLH-GRIGKQCRERWYNHL 135
                       79******************************.*************97 PP
3Myb_DNA-binding49.31.1e-15141183145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       + +WT++E++ l++a++ +G++ W+   ++++ gRt++ +k++w+
  Migut.A00232.1.p 141 KEAWTQDEELALIRAHQIHGNK-WAELTKYLP-GRTDNAIKNHWN 183
                       579*******************.*********.***********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.5033283IPR017930Myb domain
SMARTSM007179.4E-153685IPR001005SANT/Myb domain
PfamPF002493.5E-153783IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.6E-223891IPR009057Homeodomain-like
SuperFamilySSF466895.53E-163893IPR009057Homeodomain-like
CDDcd001672.45E-134083No hitNo description
PROSITE profilePS5129431.10984139IPR017930Myb domain
SuperFamilySSF466897.86E-3186182IPR009057Homeodomain-like
SMARTSM007171.4E-1888137IPR001005SANT/Myb domain
PfamPF002491.3E-1789135IPR001005SANT/Myb domain
CDDcd001672.61E-1691135No hitNo description
Gene3DG3DSA:1.10.10.603.0E-2692138IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.7E-21139190IPR009057Homeodomain-like
SMARTSM007171.0E-14140188IPR001005SANT/Myb domain
PROSITE profilePS5129419.423140190IPR017930Myb domain
PfamPF002497.6E-14141184IPR001005SANT/Myb domain
CDDcd001672.39E-11143183No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 976 aa     Download sequence    Send to blast
MESDRIRNTF ADGAGDGVHR ARPSHGRTSG PTRRSTKGQW TAEEDEILRM AVQRFNGKNW  60
KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEMI IELVKTYGPK KWSTIAQHLH  120
GRIGKQCRER WYNHLNPGIN KEAWTQDEEL ALIRAHQIHG NKWAELTKYL PGRTDNAIKN  180
HWNSSVKKKL DMYLASGLLS QFQGLPLVIH SNHSAASSTS KAQQSSEDDR DRAEIEEASE  240
CSQCSNVAGI SQSTNDATNR SKQPRRDYKR TEESCLIPSS EDYYRASQEV TYAVPDLPCE  300
LGDKFLENDL ILDWGAFVGK DWQQNTNSML DLGRESSGLF MPSLTGRDNH DNVPFPTETY  360
MELGASTSMG NMVVGSDISN QIAHADGNTV YPEDGRDGFP CENVTSDIDG PTGSFHDFSN  420
YQMPFVPSDM PGTSFAQPCP ISSQLPPDGS QIFSMNPDQF NYSAHGTTEQ DSMSQRMNDC  480
FVYVESDCSP CEDKSIEATR SPRLVPANDF VLGPVSDAQC CSSGDKDPVE SDEQKDSGAL  540
FYEPPRFPSL DVPFFSCDLI QPGGDVHQEY SPLGIRQLMI SSMNPYKLWD LPSRDNSPVA  600
VLKSAAKSFT GTPSILKKRH RDLMSPLSDK RVEKKFEGSF KTESLANLTN DLSRLEVMFN  660
ECMDEKGEGN FEAPSAEKEN VAPPCEQAKN EGNERILLSE SRISQKESNI CENSENLTEK  720
TAVAEVKPES VAKDATNTAK EFSGILVEHD MNDVLFFSPD RFGIKGDRYA RKLDALSKHG  780
AFLSSAETSR FSSHCSPRFC TKDGLQSSSP SGKKAESSGK GIAFENNSIY LETPFKRRTE  840
SPSPWKSPWF MNNFVPGPRV DTDISIEDIG YFLSPGNQSY DAIGLMKQLG EQTAGAFADA  900
QVVLGDETPE TLSKIKCSIN PNSQTEHDPL SASISMAERR TLDFSECVTP AKETGKFSSG  960
ISFASPSSYL LKGFR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C8e-67371906159MYB PROTO-ONCOGENE PROTEIN
1h89_C8e-67371906159MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.A00232.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012857783.10.0PREDICTED: myb-related protein 3R-1-like
TrEMBLA0A0K1SB810.0A0A0K1SB81_REHGL; 3R MYB protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31072448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11510.11e-172myb domain protein 3r-4