PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.S095200.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | bZIP | ||||||||
Protein Properties | Length: 399aa MW: 43149.8 Da PI: 6.5715 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.5 | 3.8e-10 | 200 | 248 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 kr++r + NR +A rs +RK +i eLe+kv++L++e ++L +l + Manes.S095200.1.p 200 KRAKRIIANRQSAARSKERKARYILELERKVQTLQTEATTLSAQLTLFQ 248 9****************************************99887655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.3E-15 | 196 | 260 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.473 | 198 | 261 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.32E-10 | 200 | 251 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.1E-10 | 200 | 254 | No hit | No description |
Pfam | PF00170 | 6.3E-9 | 200 | 248 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 3.73E-24 | 201 | 250 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 399 aa Download sequence Send to blast |
MEMQDPQDKH SLNPISNSNS NSNSHFDPNS QNVALKNPLP DAPSSTSMFS ARPASHHRRA 60 HSEMSFRLPD DMTMMMMDLS PSDPINGGGA GGGGRTGGGG GVGGGSSAGS FEEIGSEDDL 120 FSTYIDVDKL TGGGNVDGRN SMDHNNNNHG EGDKGASLTT TRPTHRHSNS VDGSAFGEVM 180 DAKKAMPPDK LAELWNLDPK RAKRIIANRQ SAARSKERKA RYILELERKV QTLQTEATTL 240 SAQLTLFQRD TTGLSTENTE LKLRLQAMEQ QAQLRDALNE ALKKEVERLK IATGETISPS 300 ESFNLGMNQM PYSPSIFFPF PQQPGPASHP NMQFPPFAHS QPNMPAQHLH QTHSHSFSEL 360 MKNDPLGRLQ GLDISSKGLN IVKSEGPSLS ASESSSTF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 92 | 100 | GGRTGGGGG |
2 | 95 | 105 | TGGGGGVGGGS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.S095200.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021603088.1 | 0.0 | transcription factor RF2b-like | ||||
Swissprot | O22873 | 1e-105 | BZP18_ARATH; bZIP transcription factor 18 | ||||
TrEMBL | A0A199U9C5 | 0.0 | A0A199U9C5_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_013312m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1548 | 34 | 97 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40620.1 | 6e-98 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.S095200.1.p |
Publications ? help Back to Top | |||
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