PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.18G144000.3.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family G2-like
Protein Properties Length: 345aa    MW: 38123.8 Da    PI: 8.8096
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.18G144000.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like857.6e-27246300155
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          k+r+rWt+eLH+ F++av+ LGG+e AtPk++l +m+vkgL ++hvkSHLQ ++l
  Manes.18G144000.3.p 246 KQRIRWTTELHDLFLDAVKALGGPEIATPKKVLGIMNVKGLNIYHVKSHLQFFKL 300
                          79*************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.7E-24243301IPR009057Homeodomain-like
SuperFamilySSF466891.09E-13244300IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-20246300IPR006447Myb domain, plants
PfamPF002491.2E-5250296IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MNTHTVISLN RRENSRVMHT HYSGVSPLYS AVNFDSLQPQ CIPPKPVNSI TTQLQQKTNA  60
NPVPNHSPSS TSHSPGLKST MFCTDLHLSS MKSSETNRPL GISPFLPHPH PSPPIVNLVI  120
PSIESSLFMG GAMTTESEND NLNSLMDLFD IPSKLPIGRF QGSQPATQGL VFTEQMGLEY  180
ISKELGIDDD RNDPMLDGIF EMPQVSSSIS FNGLNCKSNG DSSLAHQAGG ACYNHGRLHE  240
AAASSKQRIR WTTELHDLFL DAVKALGGPE IATPKKVLGI MNVKGLNIYH VKSHLQFFKL  300
MENIICRNIG LPRIFQSRSM IKRQKIRQLL QTMIMMHELK VICK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-17246299255Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-17246299255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-17246299255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-17246299255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-17246299255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-17246299255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-17246299255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-17246299255Protein PHOSPHATE STARVATION RESPONSE 1
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.18G144000.3.p
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021600079.10.0myb family transcription factor PHL6-like
RefseqXP_021600080.10.0myb family transcription factor PHL6-like
TrEMBLA0A2C9U4970.0A0A2C9U497_MANES; Uncharacterized protein
STRINGcassava4.1_034089m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13040.21e-25G2-like family protein