PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.18G144000.2.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family G2-like
Protein Properties Length: 445aa    MW: 48902 Da    PI: 7.7592
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.18G144000.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like93.51.7e-29246300155
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          k+r+rWt+eLH+ F++av+ LGG+e AtPk++l +m+vkgL ++hvkSHLQkYRl
  Manes.18G144000.2.p 246 KQRIRWTTELHDLFLDAVKALGGPEIATPKKVLGIMNVKGLNIYHVKSHLQKYRL 300
                          79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.4E-27243301IPR009057Homeodomain-like
PROSITE profilePS5129411.878243303IPR017930Myb domain
SuperFamilySSF466898.6E-16244301IPR009057Homeodomain-like
TIGRFAMsTIGR015574.7E-23246301IPR006447Myb domain, plants
PfamPF002494.8E-7250299IPR001005SANT/Myb domain
PfamPF143792.6E-15332376IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MNTHTVISLN RRENSRVMHT HYSGVSPLYS AVNFDSLQPQ CIPPKPVNSI TTQLQQKTNA  60
NPVPNHSPSS TSHSPGLKST MFCTDLHLSS MKSSETNRPL GISPFLPHPH PSPPIVNLVI  120
PSIESSLFMG GAMTTESEND NLNSLMDLFD IPSKLPIGRF QGSQPATQGL VFTEQMGLEY  180
ISKELGIDDD RNDPMLDGIF EMPQVSSSIS FNGLNCKSNG DSSLAHQAGG ACYNHGRLHE  240
AAASSKQRIR WTTELHDLFL DAVKALGGPE IATPKKVLGI MNVKGLNIYH VKSHLQKYRL  300
AKDFPEQKHD KKTENKAASS NNDNDARIKS DMQVTEALRM QIEVQKLLHQ QLKTQKELQL  360
RVEKNGELLR KLMEEQPSLL NSLSKSDQQL SPSSSDIVSS TRPPVDGSSS QPSTHEPSKS  420
ESTCHKRLRG ESSSRAASID RSDV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-19246302258Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-19246302258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-19246302258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-19246302258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-19246302258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-19246302258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-19246302258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-19246302258Protein PHOSPHATE STARVATION RESPONSE 1
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.18G144000.2.p
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021600079.10.0myb family transcription factor PHL6-like
RefseqXP_021600080.10.0myb family transcription factor PHL6-like
TrEMBLA0A251ITK90.0A0A251ITK9_MANES; Uncharacterized protein
STRINGcassava4.1_034089m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13040.27e-42G2-like family protein