PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.18G118800.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 193aa    MW: 21220.9 Da    PI: 4.5902
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.18G118800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.8e-181464155
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         s+y+G+r++k +g+Wv+eIr+p   gk++r++lg++  +e+Aa+a++ a++ l+g
  Manes.18G118800.1.p 14 SRYRGIRQRK-WGKWVSEIREP---GKKTRIWLGSYELPEMAAAAYDVAALHLRG 64
                         79*******9.**********8...557*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541718.5E-211473IPR016177DNA-binding domain
CDDcd000185.02E-201474No hitNo description
PfamPF008472.6E-121464IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-291573IPR001471AP2/ERF domain
SMARTSM003808.4E-331578IPR001471AP2/ERF domain
PROSITE profilePS5103222.011572IPR001471AP2/ERF domain
PRINTSPR003671.2E-111627IPR001471AP2/ERF domain
PRINTSPR003671.2E-115474IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MEQISADAHQ ASPSRYRGIR QRKWGKWVSE IREPGKKTRI WLGSYELPEM AAAAYDVAAL  60
HLRGPGVHLN FPELVDSFPR PKSSRAEDVQ MAAQEAALWF RNTRSMMRCS EMVDGSSGGG  120
SDGGCGGGLG PVRTGLSPSQ IQAINETPLD SPKMWMELAG ALLLGEPMVF GDDDFEFNEF  180
EEIQDALPIW DY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-161177168ATERF1
3gcc_A2e-161177168ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.18G118800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021601912.11e-141ethylene-responsive transcription factor ERF022-like
SwissprotQ9LQ285e-49ERF22_ARATH; Ethylene-responsive transcription factor ERF022
TrEMBLA0A2C9U2R11e-139A0A2C9U2R1_MANES; Uncharacterized protein
STRINGcassava4.1_033833m1e-140(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.18e-47ERF family protein