PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.18G097200.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 151aa    MW: 17004.1 Da    PI: 7.41
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.18G097200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.65.6e-172063148
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
                         s+y GVr+++ +gr++AeIr p++   + r++lg+f+taeeAa a++ 
  Manes.18G097200.1.p 20 SRYLGVRRRP-WGRYAAEIRNPYT---KERHWLGTFDTAEEAAIAYDL 63
                         7899******.**********865...5******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.69E-252078No hitNo description
PfamPF008471.0E-92063IPR001471AP2/ERF domain
SuperFamilySSF541714.71E-182079IPR016177DNA-binding domain
PROSITE profilePS5103220.3762179IPR001471AP2/ERF domain
SMARTSM003801.8E-232185IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-242178IPR001471AP2/ERF domain
PRINTSPR003675.8E-92233IPR001471AP2/ERF domain
PRINTSPR003675.8E-94460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MENLPPLLYR NPRRSPRQSS RYLGVRRRPW GRYAAEIRNP YTKERHWLGT FDTAEEAAIA  60
YDLSSISFSG IERARTNFYY PFWCFPPSPP LPAAAVPPPP PSPTPAHQRE ESGESLSMEI  120
MTTSSQDDES MVIASILQSF CQSTTGSFFP *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1518701164Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.18G097200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021600126.11e-106ethylene-responsive transcription factor LEP-like
TrEMBLA0A2C9U2U51e-105A0A2C9U2U5_MANES; Uncharacterized protein
STRINGcassava4.1_025242m1e-105(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF145131317
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12890.18e-29ERF family protein