PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Manes.18G092700.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 351aa MW: 37833.6 Da PI: 10.0935 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.2 | 1.5e-12 | 269 | 323 | 3 | 57 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 + +r+rr++kNRe+A rsR+RK+a++ eLe + Le+eN++L ke ee +ke Manes.18G092700.2.p 269 AQQRQRRMIKNRESAARSRERKRAYQVELECLAVRLEEENERLLKEKEERTKERF 323 679***************************************9999887776654 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-11 | 264 | 327 | No hit | No description |
SMART | SM00338 | 1.8E-9 | 267 | 331 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.806 | 269 | 321 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.9E-11 | 269 | 326 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 5.74E-17 | 271 | 317 | No hit | No description |
SuperFamily | SSF57959 | 2.6E-8 | 272 | 320 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 274 | 289 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 351 aa Download sequence Send to blast |
MASSKVMASS KPKSSDLTSS SATARSRRAS SSSSSASAAA ASVSVASSST KSLNAFSSSS 60 SDQIKSNFRN LTPSSSSSAV TTMTVDGILR NAYPTPSAES TLLDAQITLV DTPAPLLPAT 120 PPPQPSPAVT TATIEINHSN SSNNQELNGV LPQASKTVDD VWREIVSGRK EMKEEPDEMM 180 TLEDFLAKAG AVDVGEEDEV KMPPPERLSG GVYAFDPIPP SAFQMLDKVE GSIVGFGSGA 240 DGVVGGGGRG VGRGKRGRTT IMEPLDKAAQ QRQRRMIKNR ESAARSRERK RAYQVELECL 300 AVRLEEENER LLKEKEERTK ERFKQLMEKV VPVVEKRRPP RRLRRVHSMQ * |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Binds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}. |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Manes.18G092700.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_021601302.1 | 0.0 | G-box-binding factor 4-like isoform X1 | ||||
Refseq | XP_021601305.1 | 0.0 | G-box-binding factor 4-like isoform X3 | ||||
Swissprot | P42777 | 2e-60 | GBF4_ARATH; G-box-binding factor 4 | ||||
TrEMBL | A0A2C9U1S3 | 0.0 | A0A2C9U1S3_MANES; Uncharacterized protein | ||||
TrEMBL | A0A2C9U2W2 | 0.0 | A0A2C9U2W2_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_010851m | 0.0 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G44080.1 | 4e-26 | bZIP family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Manes.18G092700.2.p |