PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.18G092700.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 359aa    MW: 38738.6 Da    PI: 9.7768
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.18G092700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.21.5e-12269323357
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                          + +r+rr++kNRe+A rsR+RK+a++ eLe  +  Le+eN++L ke ee +ke  
  Manes.18G092700.1.p 269 AQQRQRRMIKNRESAARSRERKRAYQVELECLAVRLEEENERLLKEKEERTKERF 323
                          679***************************************9999887776654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.8E-11264327No hitNo description
SMARTSM003381.8E-9267331IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.806269321IPR004827Basic-leucine zipper domain
PfamPF001708.2E-11269326IPR004827Basic-leucine zipper domain
CDDcd147072.53E-17271317No hitNo description
SuperFamilySSF579592.67E-8272320No hitNo description
PROSITE patternPS000360274289IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MASSKVMASS KPKSSDLTSS SATARSRRAS SSSSSASAAA ASVSVASSST KSLNAFSSSS  60
SDQIKSNFRN LTPSSSSSAV TTMTVDGILR NAYPTPSAES TLLDAQITLV DTPAPLLPAT  120
PPPQPSPAVT TATIEINHSN SSNNQELNGV LPQASKTVDD VWREIVSGRK EMKEEPDEMM  180
TLEDFLAKAG AVDVGEEDEV KMPPPERLSG GVYAFDPIPP SAFQMLDKVE GSIVGFGSGA  240
DGVVGGGGRG VGRGKRGRTT IMEPLDKAAQ QRQRRMIKNR ESAARSRERK RAYQVELECL  300
AVRLEEENER LLKEKEERTK ERFKQLMEKV VPVVEKRRPP RRLRRVHSMQ CFDFYTGA*
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.18G092700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021601302.10.0G-box-binding factor 4-like isoform X1
SwissprotP427772e-60GBF4_ARATH; G-box-binding factor 4
TrEMBLA0A2C9U2W20.0A0A2C9U2W2_MANES; Uncharacterized protein
STRINGcassava4.1_010851m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.16e-26bZIP family protein