PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.18G049100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | bZIP | ||||||||
Protein Properties | Length: 151aa MW: 17536.7 Da PI: 9.2261 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.9 | 1.4e-15 | 64 | 121 | 5 | 62 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 k+ rr+++NRe+ArrsR RKk+ +e+Le v Le +N +Lkk+l ++ +++ l e Manes.18G049100.1.p 64 KKRRRMISNRESARRSRWRKKQHLENLEVQVNRLEIQNWELKKRLGSILEQCHVLWRE 121 899**********************************************999877655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.0E-14 | 60 | 124 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.358 | 62 | 125 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.6E-13 | 62 | 118 | No hit | No description |
Pfam | PF00170 | 3.8E-13 | 64 | 122 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.06E-12 | 64 | 117 | No hit | No description |
CDD | cd14702 | 3.24E-17 | 65 | 116 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 67 | 82 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence Send to blast |
MFCSQDPIHF QYPVNETGFT ASEIQELLSL FESPTHSPNS GLGSNSNSNS NSNSNRVGYS 60 VDEKKRRRMI SNRESARRSR WRKKQHLENL EVQVNRLEIQ NWELKKRLGS ILEQCHVLWR 120 ENEQLTTEYL VLQARLSDLR HALVAMQLPQ * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.18G049100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021601535.1 | 1e-107 | basic leucine zipper 4-like | ||||
TrEMBL | A0A2C9U0N3 | 1e-106 | A0A2C9U0N3_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_030176m | 2e-96 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5996 | 30 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49760.1 | 2e-22 | basic leucine-zipper 5 |
Link Out ? help Back to Top | |
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Phytozome | Manes.18G049100.1.p |