PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.18G048100.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 325aa    MW: 36429.2 Da    PI: 8.416
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.18G048100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1506.6e-16254303555
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                          +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN++L+k+ ++l+++
  Manes.18G048100.1.p 254 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKR-KQLENM 303
                          79****************************************55.677776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.6E-15244301No hitNo description
SMARTSM003383.1E-13250322IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.691252297IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.81E-11254299No hitNo description
CDDcd147076.90E-23254306No hitNo description
PfamPF001701.2E-12254297IPR004827Basic-leucine zipper domain
PROSITE patternPS000360257272IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MGVQTMGSQG DGSSDGKQSQ FQSLARQNSM YSLTLDEVQN HLGDLGKPLS SMNLDELLKN  60
VWTVEANHSM GAEVEGTQLA NQTALQRQAS LSLTGALSKK TVDEVWRDIQ QNKNNGEKKS  120
RERQPTLGEM TLEDFLVKAG VVAEASLEKK DGDPVLGVDT NIGPQFPQQQ GQWMQYPHPQ  180
YQHPQQQMMG VYMPAQPMPQ PLHVGAGPVM DVSYPENQVA LPLPSPLMGT LSDVQTHARK  240
RGTPEDMIEK TVERRQKRMI KNRESAARSR ARKQAYTNEL ENKVSRLEEE NERLRKRKQL  300
ENMLPCVPIP EPKYQLRRTT SAPF*
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.18G048100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021600989.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_021600990.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES31e-98AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A251IQ680.0A0A251IQ68_MANES; Uncharacterized protein
STRINGcassava4.1_011841m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.15e-82ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]