PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.18G037900.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 407aa    MW: 43723.2 Da    PI: 10.2495
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.18G037900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.83.1e-15328378555
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                          +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L k+   + ++
  Manes.18G037900.1.p 328 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELLKKQAAMMEM 378
                          79************************************9776655444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.6E-14324389IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.036326371IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.0E-14328385No hitNo description
PfamPF001706.4E-13328379IPR004827Basic-leucine zipper domain
CDDcd147074.85E-26328382No hitNo description
SuperFamilySSF579594.75E-11328378No hitNo description
PROSITE patternPS000360331346IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0010255Biological Processglucose mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MGTNINFKNF TNDPSADAGG GAGSATRPPG NFPLARQTSI YSLTFDEFQN TMGGIGKDFG  60
SMNMDELLKN IWSAEETQSM VASSGAAQEN LQRQGSLTLP RTLSQKTVDE VWKDISKDYG  120
NGGGTAAANL PQRQQTLGEM TLEEFLVRAG VVREDVQLAA KVNANGGFLA DLSKTGTYSA  180
LGMGFQQNRS LGLNNNNTNQ ISMHSSNLPL NVNGVRSNQA QVQQQQQIFP KQPNLGYATQ  240
MPLQSSPGMR GGIMGIGDQG ISGGLMQGGA LGMVGLGGAV TGSPANQLSS DGITKSGDTS  300
SVSPVPYVFN GGLRGRRASG AVEKVVERRQ RRMIKNRESA ARSRARKQAY TMELEAEVAK  360
LKEENQELLK KQAAMMEMQK NQVMEMMNQQ QGVKKRCLRR TQTGPW*
Functional Description ? help Back to Top
Source Description
UniProtInvolved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00186DAPTransfer from AT1G45249Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.18G037900.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021601955.10.0bZIP transcription factor 23-like isoform X1
SwissprotQ9M7Q41e-131AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLA0A251IQF60.0A0A251IQF6_MANES; Uncharacterized protein
STRINGcassava4.1_007256m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19623481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.11e-108abscisic acid responsive elements-binding factor 2
Publications ? help Back to Top
  1. Gao S, et al.
    ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis.
    Mol Plant, 2016. 9(9): p. 1272-1285
    [PMID:27373216]
  2. Seok HY, et al.
    Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.
    Planta, 2017. 245(2): p. 329-341
    [PMID:27770200]