PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.18G014300.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family C2H2
Protein Properties Length: 368aa    MW: 40227 Da    PI: 8.9572
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.18G014300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.81.9e-05166188223
                          EETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                           C+ Cg++F+  ++L+ H+++ H
  Manes.18G014300.1.p 166 ACSQCGEVFPKAESLELHQKVrH 188
                          6*******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.64165189IPR007087Zinc finger, C2H2
PROSITE patternPS000280165188IPR007087Zinc finger, C2H2
SuperFamilySSF563992.11E-12258363No hitNo description
Gene3DG3DSA:3.90.228.101.1E-7287364IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MAPLTFLPDH SEQGKQPSKR NRKLQKQKQK KPSSWDQIKN LLTCKQIEGS SVHDPSKNHN  60
GYSKLGSSCS SICSFRDVVH GNTRVVHRAD NSPESSTVGQ ETGLLSRKAV SGSSTRSLAS  120
SGRSKPGATY TSSSKGMQFR KLYGCYECHM IVDPSRYPSP RTTICACSQC GEVFPKAESL  180
ELHQKVRHAD TVVNSIFFFF FFIHLPQLKT QNRINTEKSA HVFPILYDQL SKYMLSLTCA  240
LGARGSSNLC SSIPDCGVCT IIRHGFQGKE CKGVRTTASS GVAHDSLIGC TDGQRAMLVC  300
RVIAGRVKRV ADDVPPPEED AATSIVGTLY DSVAGCIGIY SNLEELFVFN PRAILPCFVV  360
IYRVVEC*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.18G014300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021682634.10.0uncharacterized protein LOC110666452
TrEMBLA0A2C9U1700.0A0A2C9U170_MANES; Uncharacterized protein
STRINGXP_002510523.11e-177(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF103413037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-101C2H2-like zinc finger protein