PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.18G005000.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 315aa    MW: 34916.4 Da    PI: 4.6846
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.18G005000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1292.3e-09150194246
                          XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                          +++k+ rr  +N+ AA rsR+RKk+ +  Le k+  Le+e ++L 
  Manes.18G005000.1.p 150 PSSKKRRRQLRNKDAAFRSRERKKMHVRDLEIKSRYLEGECRRLG 194
                          689************************************998775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.6E-10146208No hitNo description
SMARTSM003380.002148213IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.45151193IPR004827Basic-leucine zipper domain
PfamPF001702.9E-7151193IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.44E-9153208No hitNo description
CDDcd147041.48E-14154205No hitNo description
PROSITE patternPS000360156171IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MEDPEFQEDD ILLKLDFDDL GRLDWDNLFT GLPEASPPSL QASSSPANFC NSSPDSVSSW  60
IGELENILMK DDDDSVAVEP TQQLSNDFLA DILVDSPPAV SAEVVDAAIN RDSSASDNGI  120
GSASETEKDR KKEVADGAEV RSDGQDPEDP SSKKRRRQLR NKDAAFRSRE RKKMHVRDLE  180
IKSRYLEGEC RRLGRLLQCV IAENQALHLS LQKGNAFGVT SAKQESAVLL LESLLLGSLL  240
WFLGIMCLFT QLRLPHSTPV PVSLENREKE VPEGGEGSKM FTPLLILSFV SSRRCKASRT  300
RMKPRFIFIG DLTY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.18G005000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021600128.10.0bZIP transcription factor 60-like
TrEMBLA0A2C9U0T90.0A0A2C9U0T9_MANES; Uncharacterized protein
STRINGXP_002510740.11e-112(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120093032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.17e-24basic region/leucine zipper motif 60