PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.18G001000.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 263aa    MW: 29185.8 Da    PI: 4.7872
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.18G001000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.87.3e-11150194246
                          XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                          +++k+ rr  +NR AA rsR+RKk+++  Le k+  Le+e ++L 
  Manes.18G001000.1.p 150 PSSKKRRRQLRNRDAALRSRERKKMYVRDLEIKSRYLEGECRRLG 194
                          689************************************998775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.8E-11148207No hitNo description
SMARTSM003387.5E-4149206IPR004827Basic-leucine zipper domain
PfamPF001709.4E-9151193IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.76151193IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.69E-10153208No hitNo description
CDDcd147041.10E-15154205No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MEDPEFQEDD ILLKLDFDDL GRLDWDNLFT GLPEASPPSL QASSSPANFC NSSPDSVSSW  60
IGQLENILMK DDDNSVAVEP TQQLSNDFLA DILVDSPPAV SAEVVDAATN RDSSASDNGI  120
GSASEREKDR KKVVDDGAEV RSDGQDPQDP SSKKRRRQLR NRDAALRSRE RKKMYVRDLE  180
IKSRYLEGEC RRLGRLLQCV IAENQALHIS LQKGNAFGVT SAKQESAVLL LGMCHKLNIL  240
PHVAYMIILV PKSGDRRREM LF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153172KRRRQLRNRDAALRSRERKK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.18G001000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021600280.10.0bZIP transcription factor 60-like
TrEMBLA0A2C9TZE20.0A0A2C9TZE2_MANES; Uncharacterized protein
STRINGcassava4.1_026447m1e-107(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120093032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.14e-22basic region/leucine zipper motif 60