PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.17G056600.4.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family G2-like
Protein Properties Length: 395aa    MW: 44995.3 Da    PI: 9.113
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.17G056600.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.21.4e-3178131255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          prlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+
  Manes.17G056600.4.p  78 PRLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 131
                          8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.62874134IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.0E-2974132IPR009057Homeodomain-like
SuperFamilySSF466892.33E-1476132IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-2278133IPR006447Myb domain, plants
PfamPF002499.9E-979130IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MMEEIEKSGT GSEQEQAENN SLVSSSQKCS SFDLNEEASS EEEDEKRTEG SSSANNNSSN  60
GKNERRATVR QYVRSKMPRL RWTPDLHLSF VHAVERLGGQ ERATPKLVLQ LMNVRGLSIA  120
HVKSHLQMYR SKKLDEAGQV LSHAYRSMQR IDSVNSGMLH QITTAPQQHF RMENGGIVLA  180
RTSIHHQNTF DHKLLLSSFS QSQSFNASFS KRQHLSSYQL HDERRQISTL TSKDLGQELD  240
TTMQSGPLRP SRFLEERRWP PLEMVKSRWK STTNPTDIIT YSETEAHQIG NLLSRSSPGA  300
TCYWKPTETD QAGKSTMVKQ SLFNSHDSIS DFNCFKLKFQ PPFRFELNQD KVLKDNKEWL  360
PDLQLRLSQR VGMDENKSSH CRSAQEISTK LSLS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-1779133458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-1779133458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-1779133357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-1779133357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-1779133357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-1779133357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-1779133458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-1779133458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-1779133458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-1779133458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-1779133458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-1779133458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.17G056600.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021598708.10.0uncharacterized protein LOC110604734
RefseqXP_021598709.10.0uncharacterized protein LOC110604734
RefseqXP_021598710.10.0uncharacterized protein LOC110604734
TrEMBLA0A251IV740.0A0A251IV74_MANES; Uncharacterized protein
STRINGcassava4.1_033889m1e-127(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.18e-38G2-like family protein