PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.17G056600.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | G2-like | ||||||||
Protein Properties | Length: 395aa MW: 44995.3 Da PI: 9.113 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 100.2 | 1.4e-31 | 78 | 131 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+ Manes.17G056600.2.p 78 PRLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 131 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.628 | 74 | 134 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.0E-29 | 74 | 132 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.33E-14 | 76 | 132 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.6E-22 | 78 | 133 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 9.9E-9 | 79 | 130 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 395 aa Download sequence Send to blast |
MMEEIEKSGT GSEQEQAENN SLVSSSQKCS SFDLNEEASS EEEDEKRTEG SSSANNNSSN 60 GKNERRATVR QYVRSKMPRL RWTPDLHLSF VHAVERLGGQ ERATPKLVLQ LMNVRGLSIA 120 HVKSHLQMYR SKKLDEAGQV LSHAYRSMQR IDSVNSGMLH QITTAPQQHF RMENGGIVLA 180 RTSIHHQNTF DHKLLLSSFS QSQSFNASFS KRQHLSSYQL HDERRQISTL TSKDLGQELD 240 TTMQSGPLRP SRFLEERRWP PLEMVKSRWK STTNPTDIIT YSETEAHQIG NLLSRSSPGA 300 TCYWKPTETD QAGKSTMVKQ SLFNSHDSIS DFNCFKLKFQ PPFRFELNQD KVLKDNKEWL 360 PDLQLRLSQR VGMDENKSSH CRSAQEISTK LSLS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 3e-17 | 79 | 133 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 3e-17 | 79 | 133 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 4e-17 | 79 | 133 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 4e-17 | 79 | 133 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 4e-17 | 79 | 133 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 4e-17 | 79 | 133 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 3e-17 | 79 | 133 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 3e-17 | 79 | 133 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 3e-17 | 79 | 133 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 3e-17 | 79 | 133 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 3e-17 | 79 | 133 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 3e-17 | 79 | 133 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.17G056600.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021598708.1 | 0.0 | uncharacterized protein LOC110604734 | ||||
Refseq | XP_021598709.1 | 0.0 | uncharacterized protein LOC110604734 | ||||
Refseq | XP_021598710.1 | 0.0 | uncharacterized protein LOC110604734 | ||||
TrEMBL | A0A251IV74 | 0.0 | A0A251IV74_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_033889m | 1e-127 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 8e-38 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.17G056600.2.p |