PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.17G026000.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family G2-like
Protein Properties Length: 303aa    MW: 34634.9 Da    PI: 9.1362
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.17G026000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like106.21.8e-3361114255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          prlrWtp+LH++Fv+ave+LGG+++AtPk +l++m+vkgLt++hvkSHLQ+YR+
  Manes.17G026000.1.p  61 PRLRWTPDLHHCFVHAVERLGGEDRATPKMVLQIMNVKGLTISHVKSHLQMYRS 114
                          8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.94657117IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.3E-3257116IPR009057Homeodomain-like
SuperFamilySSF466891.08E-1559115IPR009057Homeodomain-like
TIGRFAMsTIGR015579.3E-2561115IPR006447Myb domain, plants
PfamPF002493.1E-862113IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MKRLLVHSET SSKAPPPLHI PDYVLKSPSD VRLSRRDHPL SPGAIALKSP MVRPYVRSKM  60
PRLRWTPDLH HCFVHAVERL GGEDRATPKM VLQIMNVKGL TISHVKSHLQ MYRSMKHEQM  120
IQEAALAAKK NDKAPGLHYS NYFAHLDSMS CSENHHLEDK ELNNNLLLYQ QDHGTCTSPS  180
YKLALKNTSM PTQREEKQEM WIGKRLLTES FSHEEVISKE WEKKPDPYII FKDLLKSCTT  240
TQRTNEQDKN RQSLEDFGEI AQRVEGDKMS LLLNSKASES VLKLRKAESL CVKDVCLELT  300
LG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A5e-2062117358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-2062117358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-2062117358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-2062117358Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.17G026000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021598244.10.0putative Myb family transcription factor At1g14600
TrEMBLA0A2C9U5B80.0A0A2C9U5B8_MANES; Uncharacterized protein
STRINGcassava4.1_021436m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93812840
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.12e-32G2-like family protein