PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.16G043500.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family BES1
Protein Properties Length: 329aa    MW: 35346.3 Da    PI: 8.2833
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.16G043500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822215.71.1e-6621461149
               DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasasp 90 
                          ++++r+ptwkErEnnkrRERrRRaiaakiyaGLR++Gnyklpk++DnneVlkALc eAGw+ve+DGttyrkg+kp e+++++g sasasp
  Manes.16G043500.1.p   2 TSGTRTPTWKERENNKRRERRRRAIAAKIYAGLRMYGNYKLPKHCDNNEVLKALCSEAGWTVEEDGTTYRKGCKPVERMDIIGGSASASP 91 
                          5899************************************************************************************** PP

               DUF822  91 esslqsslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvsss 149
                          +ss++        +sp++sy++sp sssfpsp+s+  + +++     +sl+p+l++ls+vs s
  Manes.16G043500.1.p  92 CSSYH--------PSPCASYNPSPGSSSFPSPVSSRYTANTNGnadaNSLIPWLKNLSSVSVS 146
                          *****........*******************998877666556788**********997655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.9E-673141IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MTSGTRTPTW KERENNKRRE RRRRAIAAKI YAGLRMYGNY KLPKHCDNNE VLKALCSEAG  60
WTVEEDGTTY RKGCKPVERM DIIGGSASAS PCSSYHPSPC ASYNPSPGSS SFPSPVSSRY  120
TANTNGNADA NSLIPWLKNL SSVSVSSKHP HHLFIHSGSI SAPVTPPLSS PTARTPRTKN  180
DWDDPAGGPS WAGQNYPFPS SMPSSTPPSP GRQVIPDSGW LAGIEIPQSG PSSPTFSLVS  240
RNPFGFRDEP LSGTGSRMWT PGQSGTCSPA VPAGADQTAD VPMPDSMAAE FAFGNHTTWL  300
VKAWEGERIH EECVPDDLEL TLGNSKTR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.16G043500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021596143.10.0BES1/BZR1 homolog protein 4-like isoform X1
RefseqXP_021596144.10.0BES1/BZR1 homolog protein 4-like isoform X2
SwissprotQ9ZV881e-134BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A2C9U9N00.0A0A2C9U9N0_MANES; Uncharacterized protein
STRINGcassava4.1_011709m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-118BES1/BZR1 homolog 4