PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.16G040600.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family G2-like
Protein Properties Length: 357aa    MW: 41192 Da    PI: 9.8015
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.16G040600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.42.4e-3168122155
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          kprlrW+p+LH +Fv+ave+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+
  Manes.16G040600.1.p  68 KPRLRWSPDLHLSFVHAVEKLGGQERATPKLVLQLMNVRGLSVAHVKSHLQMYRS 122
                          79****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.26265125IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.2E-2965123IPR009057Homeodomain-like
SuperFamilySSF466898.06E-1566123IPR009057Homeodomain-like
TIGRFAMsTIGR015575.7E-2368124IPR006447Myb domain, plants
PfamPF002491.1E-870121IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MEEVEKAENT SLISSSQKCS YFDLNEEASS EEDDDQKSAE ASPSANNNSS NERNGHRTTV  60
RQYNRSKKPR LRWSPDLHLS FVHAVEKLGG QERATPKLVL QLMNVRGLSV AHVKSHLQMY  120
RSKKLDEAGQ VLSHAYRYMQ RRDGTLHQIT TTAPQQHLRM ENGGIVLPGN LHSSFSQSHK  180
PLCFKASFSR DRHWSSKQLV RRRQTTTLTR KDLEHSRFLE ERRWPPLEMF KNRWKVATDS  240
SWLNACSEPD AHQISNPSRS AGATYNWKPD EEEVGNNTMV KQSLFNSHDS IRNFRFFKAT  300
FEPPFRLELN EEKVLKDNKE WLPDLQLRLS QSVGIDENKR SHCRSTQEIS TKLSLS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A6e-1768124258Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B6e-1768124258Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A6e-1768124157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B6e-1768124157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C6e-1768124157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D6e-1768124157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A6e-1768124258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C6e-1768124258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D6e-1768124258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F6e-1768124258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H6e-1768124258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J6e-1768124258Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.16G040600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021670025.11e-168uncharacterized protein LOC110657212
TrEMBLA0A2C9U8M70.0A0A2C9U8M7_MANES; Uncharacterized protein
STRINGcassava4.1_025535m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF30123270
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-35G2-like family protein