PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.16G033500.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | VOZ | ||||||||
Protein Properties | Length: 482aa MW: 53098.7 Da PI: 5.5074 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 428.2 | 1.2e-131 | 208 | 424 | 2 | 217 |
VOZ 2 ppsaflgpkcalwdctrpaqg.sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspw 90 ppsaflgpkcalwdc+rpaqg + +q+ycssfh +lalneg+pgt pvlrp+gi+lkdgllfaalsak+qgk+vgipecegaatakspw Manes.16G033500.1.p 208 PPSAFLGPKCALWDCPRPAQGgLDLCQNYCSSFHHALALNEGPPGTGPVLRPGGIGLKDGLLFAALSAKAQGKDVGIPECEGAATAKSPW 297 7******************96389****************************************************************** PP VOZ 91 naaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldal 180 na+elfdls+legetirew+ffdkprrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyein++da+ Manes.16G033500.1.p 298 NAPELFDLSVLEGETIREWIFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNTFEWHLYEYEINKCDAC 387 ****************************************************************************************** PP VOZ 181 alyrlelklvdekksakgkvskdsladlqkklgrlta 217 alyrlelk vd+kk akgk++++s++dlqk+++rlta Manes.16G033500.1.p 388 ALYRLELKAVDGKKCAKGKITTESVVDLQKQMVRLTA 424 ***********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 482 aa Download sequence Send to blast |
MGKGSKINCK SASHKLFKDK AKNRVDDLQG MFMDLQFARK ESRTVDVAVL EEQVHQMLRE 60 WKAELNEPSP ASSLQQGGTL GSFSSDIYRL LQLCEEQDDA TSALAAPKPE PNDQSLQIRD 120 IVVFQEGYGV NQGQQGCNFP FVDQGKNPSS GVHGMMASTI EGAGQLDYHQ YDLSQNLELN 180 FYAGHNSTDL CVEDGVPHIS GYLSSICPPS AFLGPKCALW DCPRPAQGGL DLCQNYCSSF 240 HHALALNEGP PGTGPVLRPG GIGLKDGLLF AALSAKAQGK DVGIPECEGA ATAKSPWNAP 300 ELFDLSVLEG ETIREWIFFD KPRRAFESGN RKQRSLPDYS GRGWHESRKQ VMNEFGGLKR 360 SYYMDPQPLN TFEWHLYEYE INKCDACALY RLELKAVDGK KCAKGKITTE SVVDLQKQMV 420 RLTAEFPTDN KRCVKGRTKV NAKVSVGSVY AAPDGGAPTN ETFDYEPCNY LVENLGDYYV 480 N* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.16G033500.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021597291.1 | 0.0 | transcription factor VOZ1-like isoform X1 | ||||
Swissprot | Q9SGQ0 | 0.0 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A2C9U8K0 | 0.0 | A0A2C9U8K0_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_006612m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1498 | 34 | 94 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 0.0 | vascular plant one zinc finger protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.16G033500.1.p |
Publications ? help Back to Top | |||
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