PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.15G191900.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 423aa    MW: 45214.4 Da    PI: 6.5168
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.15G191900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.41.2e-21306368163
                          XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN  L++e++++k  +++l +e+
  Manes.15G191900.1.p 306 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENANLRSEVNRIKSDYEQLLAEN 368
                          89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077775.8E-30197IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165963.1E-56136273No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-18299364No hitNo description
PfamPF001706.3E-20306368IPR004827Basic-leucine zipper domain
SMARTSM003381.3E-20306370IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.059308371IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.44E-10309365No hitNo description
CDDcd147021.91E-24311361No hitNo description
PROSITE patternPS000360313328IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
MGSSDMDKPA KEKEAKALSG TTAQEQTSTT SAGTVNPEWT GFQAYSPIPP HGFLASSPQA  60
HPYMWGVQHI MPPYGTPPHP YVAMYPHGGL YAHPSIPPGS YPFSPFAMPS PNGINEASGY  120
TPGSTEADGK PSDVKEKLPI KRSKGSLGSL NMITGKNNEI GKTSGASANG AYSKSAESAS  180
EGTSEGSDAN SQNDSQMKSG GRQDSAEADA SQNGGSVHGP QNVGQSMPHT IMNQSMPVVP  240
IPATGAPGAL PGPTTNLNIG MDYWGPPASS AIPGIHGKVP NTPVAGGIVS TGSRDTVQSQ  300
IWLQDERELK RQRRKQSNRE SARRSRLRKQ AECDELAQRA EALKEENANL RSEVNRIKSD  360
YEQLLAENAS LKVMFSSWFD LFNIDTFFCL VFLLTGHAMN NLIADVVMLS DQFMIFFFFS  420
SL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1322328RRSRLRK
2322329RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.15G191900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021594872.10.0bZIP transcription factor 16-like isoform X2
RefseqXP_021594873.10.0bZIP transcription factor 16-like isoform X2
RefseqXP_021594874.10.0bZIP transcription factor 16-like isoform X2
SwissprotQ501B21e-174BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A2C9UJ910.0A0A2C9UJ91_MANES; Uncharacterized protein
STRINGcassava4.1_008719m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40173256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-155basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]