PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.15G186300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | bHLH | ||||||||
Protein Properties | Length: 304aa MW: 34403.4 Da PI: 7.9201 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.3 | 3.2e-14 | 98 | 149 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+e++k+L+ Manes.15G186300.1.p 98 QRMTHIAVERNRRKQMNEYLAILRSLMPES---YVQRGDQASIVGGAIEFVKELE 149 79****************************...9******************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 6.58E-12 | 96 | 153 | No hit | No description |
SuperFamily | SSF47459 | 1.14E-16 | 96 | 165 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.5E-13 | 96 | 152 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.193 | 97 | 148 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.4E-11 | 98 | 149 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.7E-10 | 103 | 154 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence Send to blast |
MTLETLSSND FLNFIIYDTV SATSYGSQDA LETNLFWESS LKSQDHGGAL SSCSLKTQQR 60 RSREPEAVDW KQNLAVQGRK KRSRKPRVCK NKEEAETQRM THIAVERNRR KQMNEYLAIL 120 RSLMPESYVQ RGDQASIVGG AIEFVKELEH LLQSLEAQKI QLLHGLKGSS EDPTISLGTY 180 NSQLLPPFAQ FFVYPQYTWS QIPNKYTSKA KAAIADIEVT LIESHASLRI LSRKRPRQLL 240 KLVTGFQTLC LTILHINVTT MDLLVLYSIS IKLEEECQLT SVDDIAGAVH HMLRIIEEET 300 SLC* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 98 | 109 | RMTHIAVERNRR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.15G186300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021594102.1 | 0.0 | transcription factor bHLH71-like | ||||
Swissprot | Q9C7T4 | 7e-80 | BH096_ARATH; Transcription factor bHLH96 | ||||
TrEMBL | A0A2C9UHA0 | 0.0 | A0A2C9UHA0_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_012613m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF10644 | 31 | 38 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 3e-82 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.15G186300.1.p |
Publications ? help Back to Top | |||
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