PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.15G135000.2.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family G2-like
Protein Properties Length: 606aa    MW: 65038.2 Da    PI: 6.9297
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.15G135000.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.72.6e-28173226155
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl
  Manes.15G135000.2.p 173 KPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 226
                          79*******************.********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011013.1761103IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23001.3E-53268No hitNo description
SuperFamilySSF521722.42E-1237113IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23008.6E-1169127No hitNo description
PROSITE profilePS5129411.209170229IPR017930Myb domain
SuperFamilySSF466891.22E-19170230IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.5E-30170231IPR009057Homeodomain-like
TIGRFAMsTIGR015572.2E-24173226IPR006447Myb domain, plants
PfamPF002498.5E-7175224IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 606 aa     Download sequence    Send to blast
MAALQRAASI VSATASNYGY CKVAAADGVV SDQFPAGLRV LVVDDDTTCL RILEQMLRRC  60
LYHVMSADRR TSAVMKGIRH GACDYLIKPI REEELKNIWQ HVVRKKWHEN KDLEPSGSLE  120
DNDRNKQVND DAEYASSVNE GTEGVLKGQK KRSSSKDEDD GEPENDDPST SKKPRVVWSV  180
ELHQQFVSAV NQLGIDKAVP KRILELMNVP GLTRENVASH LQKFRLYLKR LSGVAQHGGI  240
PNTFCGPLDP NINLNSLGRF DIQALAASGQ IPPQTLAALH AELLGRPAGS LVTTMDQPAL  300
LQASMQGPKC IPVEHGVAFG QPLVKCQSNI SKPFRQNMTP VEEVASKFGA WPSNSLGMVG  360
PNTNLGGVGT QNGNMLMDML HQQQPQQQSL SEASLSINVQ PSCLVVPSQS SASFQAGNSP  420
SSVNQSCNFN RNAVIDYSLL LSQSSLNIGH APIGNQKTTG VVSGYSVSAS ISPSASSCSV  480
NADSGINRQV QNSTITSGAD RHLPGLASNI SDVQGTYGAK SGEVLDQGPL RYLGCVGKGT  540
ILPSQFTVDE FTVPISNLSR GKIFGDNNGS KVKQEPNMEF TDNARVGVSV LQQFPPSDLM  600
SVFTE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A4e-23169232164ARR10-B
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.15G135000.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021594478.10.0two-component response regulator ORR21-like isoform X2
SwissprotA2XE311e-125ORR21_ORYSI; Two-component response regulator ORR21
SwissprotQ8H7S71e-125ORR21_ORYSJ; Two-component response regulator ORR21
TrEMBLA0A2C9UGN10.0A0A2C9UGN1_MANES; Uncharacterized protein
STRINGcassava4.1_003234m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.13e-83response regulator 2
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]