PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.14G098400.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | G2-like | ||||||||
Protein Properties | Length: 384aa MW: 42199.8 Da PI: 9.2709 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 100.9 | 8.2e-32 | 213 | 268 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++ ++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Manes.14G098400.1.p 213 KQRRCWSPELHRRFLHSLQQLGGPHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 268 79****************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 13.844 | 210 | 270 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 7.2E-28 | 210 | 271 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.2E-17 | 211 | 271 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.2E-26 | 213 | 268 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 4.4E-6 | 215 | 266 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 384 aa Download sequence Send to blast |
MDYAEKMQRC HEYVEALEVE RSKILVFKRE LPLCLELITK AIEACRRELS GTTTDYLHGQ 60 SESSEQTSSE GTKPVLEEFI PIKKTNSSSD NDNEEQYLHK RNKNSSTNKD KNSSDHKKKS 120 DWLRSAQLWN QSPDPTPKED VSRKAVETEV NRNGGAFQPF QKEKTTGKNV QTTAKNPSSV 180 PASATSSTTE TGAGGTGGGS TRKEEKDGQS ERKQRRCWSP ELHRRFLHSL QQLGGPHVAT 240 PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPPIHNNS NPQAPQFVVV GGIWVQPPEY 300 AAVAATTASG ETSTIAAAAA ANGIYTPVAA PLSTAPPKLQ KQLLKHSEQM QLEERGSHSD 360 GGFRSNSPAT SSSTHTTTNS PSF* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.14G098400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021634378.1 | 0.0 | transcription factor HHO3 | ||||
Swissprot | Q9FPE8 | 1e-113 | HHO3_ARATH; Transcription factor HHO3 | ||||
TrEMBL | A0A2C9UKC9 | 0.0 | A0A2C9UKC9_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_030590m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3918 | 33 | 63 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25550.1 | 1e-92 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.14G098400.1.p |
Publications ? help Back to Top | |||
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