PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.14G077100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | bHLH | ||||||||
Protein Properties | Length: 229aa MW: 25224.6 Da PI: 5.6882 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 18.8 | 3e-06 | 35 | 84 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 rr + erE+ R+++N+ f eL + l ++ + Ka+iL +A + +k+L Manes.14G077100.1.p 35 RRIHKAEREKLKREQLNDLFLELASALELT----QPNNGKASILSEAARLLKDL 84 788999*********************997....57799999******999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.58E-5 | 32 | 89 | No hit | No description |
PROSITE profile | PS50888 | 11.528 | 34 | 84 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.57E-10 | 34 | 98 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.3E-6 | 35 | 130 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence Send to blast |
MGLEDPLSAA DETDVAAETI GKRGCPGKKN GKIPRRIHKA EREKLKREQL NDLFLELASA 60 LELTQPNNGK ASILSEAARL LKDLLGLIEC LKKENGSLLS ESRYVTIEKN ELKEENSALD 120 TEIEQLQSEL EKRVALSKPD LNVPPPEFHH PRLTPHFPGE SLGLPAAEAT LQQAPAVFVV 180 PLHPDLQAYP RTTSNVSKPH ARYPTPADSW PSQLLGEQEQ LTARKEVQ* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.14G077100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021592750.1 | 1e-164 | transcription factor bHLH47-like | ||||
Refseq | XP_021592751.1 | 1e-164 | transcription factor bHLH47-like | ||||
Refseq | XP_021592752.1 | 1e-164 | transcription factor bHLH47-like | ||||
Swissprot | Q9SN74 | 1e-58 | BH047_ARATH; Transcription factor bHLH47 | ||||
TrEMBL | A0A251JS03 | 1e-163 | A0A251JS03_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_015506m | 1e-164 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF8223 | 25 | 31 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.3 | 4e-61 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.14G077100.1.p |