PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.14G036900.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family C2H2
Protein Properties Length: 282aa    MW: 31491.1 Da    PI: 8.3594
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.14G036900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.0015727323
                         ETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                         C++C+++F +   +  H+r+H
  Manes.14G036900.1.p  7 CKICNRRFANGKAMGGHMRSH 27
                         *******************99 PP
2zf-C2H213.30.00025214236123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          +kCp C+k+F +   L  H ++H
  Manes.14G036900.1.p 214 FKCPFCDKVFESGQALGGHKKVH 236
                          89**********99999999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.785532IPR007087Zinc finger, C2H2
SMARTSM003550.21527IPR015880Zinc finger, C2H2-like
PfamPF139123.4E-8629IPR007087Zinc finger, C2H2
PROSITE patternPS000280727IPR007087Zinc finger, C2H2
PfamPF139122.1E-10155179IPR007087Zinc finger, C2H2
SuperFamilySSF576672.74E-8155177No hitNo description
PROSITE profilePS501579.536155182IPR007087Zinc finger, C2H2
SMARTSM003550.15155177IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280157177IPR007087Zinc finger, C2H2
SuperFamilySSF576672.74E-8209236No hitNo description
PfamPF139129.7E-10214236IPR007087Zinc finger, C2H2
SMARTSM003550.0053214236IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.18214236IPR007087Zinc finger, C2H2
PROSITE patternPS000280216236IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MEKNRICKIC NRRFANGKAM GGHMRSHLAK LPLPPKPIPS EASILKSPSR SSSSSSFNYT  60
SSENPMQSYR SINHELPFMS KTNLAALQDD ESETESSRNP TRRRSKRSRK PVEKVAESKE  120
VEEYMEEEAE AEDEDEDDYE SIGEIQRRSK NKMKHKCETC QRSFRSYQAL GGHKASHKKI  180
KINLRDNEYE EEEGSGSGGI DSKNGVLGVK PRIFKCPFCD KVFESGQALG GHKKVHFSYL  240
GNAKISVKSS DNLLDLNLPA PEDDGEVSQA EVSTVSNRNG K*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.14G036900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021592998.11e-144zinc finger protein ZAT9-like
TrEMBLA0A2C9UIP40.0A0A2C9UIP4_MANES; Uncharacterized protein
STRINGcassava4.1_031734m1e-141(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76734122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.19e-25C2H2-like zinc finger protein