PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Manes.13G139500.2.p

Organism

Manihot esculenta

Taxonomic ID

3983

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot

Family

bZIP

Protein Properties

Length: 319aa MW: 35682.6 Da PI: 6.8571

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Manes.13G139500.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.2	1.1e-10	197	240	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L + Manes.13G139500.2.p 197 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 240 8999********************************98877655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.8E-14	193	257	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	5.1E-9	195	242	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.622	195	247	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.6E-11	197	248	No hit	No description
SuperFamily	SSF57959	3.78E-11	197	251	No hit	No description
CDD	cd14703	3.59E-23	198	248	No hit	No description
PROSITE pattern	PS00036	0	200	215	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence Send to blast
MAQLPPKIPN MQPTWPDFSH QKTMPPSINK AASPTAATGQ NPSWVDEFLD FSLARRGTHR 60 RSVSDSIAFL EPPLLEECRG TSGAVVAPQH QHRHSAGHNN SSSCDFDKFD DEQFMSMFND 120 DISNAVAAPS CSNPSTPSDH NSINDEKDTT APSSDQNTKQ NKIRNEPDEV QSQCQQENQT 180 PPSATDTNSS DRIVDPKRVK RILANRQSAQ RSRVRKLQYI SELERSVTSL QAEVSVLSPR 240 VAFLDHQRLL LNVDNSALKQ RIAALAQDKI FKDAHQEALK REIERLRQVY HQQNLKKMEN 300 SATDPTTAPE KEQLLLQV*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Manes.13G139500.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021632854.1	0.0	basic leucine zipper 61-like isoform X2
Swissprot	Q9M2K4	1e-125	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A2C9UST6	0.0	A0A2C9UST6_MANES; Uncharacterized protein
STRING	cassava4.1_024267m	0.0	(Manihot esculenta)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	1e-127	bZIP family protein

Link Out ? help Back to Top
Phytozome	Manes.13G139500.2.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]