PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.13G089700.2.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 361aa    MW: 40440.2 Da    PI: 6.4287
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.13G089700.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.26.4e-1276117445
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                          +k +rr+++NReAAr+sR+RKka++++Le  + +L +  ++L
  Manes.13G089700.2.p  76 DKIQRRLAQNREAARKSRLRKKAYVQQLESSCLKLIQLEQEL 117
                          799***************************999998777655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.5E-573132IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.01375118IPR004827Basic-leucine zipper domain
PfamPF001709.6E-976115IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.44E-877118No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-878119No hitNo description
PROSITE patternPS0003608095IPR004827Basic-leucine zipper domain
PfamPF141449.7E-29163237IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MDMYDHIHQI GMWGESFKSN GISNASASIF VAGNLDSSPS ILMAADTELD NQSEDTSHGT  60
LGPSSKYDLE ASKLTDKIQR RLAQNREAAR KSRLRKKAYV QQLESSCLKL IQLEQELEMA  120
RNQGLYIGGV ETSQMGFAGP INSGIATFEM GYRHWLEDQN KHTCDIRNAI NVHLSDIELR  180
ILVESGINHY SELFRMKAIA AKADVFYLMS GMWKSSAERF FLWIGGFRPS ELLKVLKPQL  240
EPLTDQQLLD VCNLKQSCQQ AEDALSQGME KLQQTLAETV AAGRLGEASH MPQMNTAMEK  300
LEGLVRFVQQ ADHLRQITLQ QMSLILTARQ AARGLLALGE YFERLRALST IWVTNPRELA  360
*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.13G089700.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021631617.10.0transcription factor TGA1-like isoform X1
RefseqXP_021631618.10.0transcription factor TGA1-like isoform X1
RefseqXP_021631619.10.0transcription factor TGA1-like isoform X1
RefseqXP_021631620.10.0transcription factor TGA1-like isoform X1
RefseqXP_021631621.10.0transcription factor TGA1-like isoform X1
RefseqXP_021631623.10.0transcription factor TGA1-like isoform X1
RefseqXP_021631624.10.0transcription factor TGA1-like isoform X1
RefseqXP_021631625.10.0transcription factor TGA1-like isoform X1
SwissprotQ392371e-170TGA1_ARATH; Transcription factor TGA1
TrEMBLA0A251JI520.0A0A251JI52_MANES; Uncharacterized protein
STRINGcassava4.1_032607m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-161bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Herrera-Vásquez A, et al.
    Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis.
    Plant Mol. Biol. Rep., 2018.
    [PMID:26696694]
  4. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  5. Sun T, et al.
    TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g).
    New Phytol., 2018. 217(1): p. 344-354
    [PMID:28898429]