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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Manes.13G013600.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
GRAS |
Protein Properties |
Length: 494aa MW: 55537.6 Da PI: 6.2383 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.13G013600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 371 | 1.6e-113 | 120 | 491 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn.sseelaalklfsevs 88
lv++L++cAeav+ +d++ a+alLa+l+ +a g+++qR+a++f+++L+ rla + +++ l+p+++s ++ +e+ al+l ++++
Manes.13G013600.1.p 120 LVQQLIACAEAVACRDKKHASALLAELRANALVFGTSFQRVASCFVQGLSDRLALlQPLGTVGVLAPQANSVNTfKAEKDEALRLVYDIC 209
689***************************************************955667788888888888778899999********* PP
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelg 173
P ++f+h++aN Ilea+ege+ vHi+D++++ +GlQW++L+++La+ p+++p +lRiTgvg+ s+e l+++g+ L +A++lg
Manes.13G013600.1.p 210 PQIQFGHFVANASILEAFEGESSVHIVDLGMTfglpHGLQWLNLIHSLAKHPGQQPhRLRITGVGN----SAELLQAIGDELDCYARSLG 295
****************************88763333789*************655549********....9******************* PP
GRAS 174 vpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealey 263
++fef v+++le+l++e++++ gE++++n++lqlh +++es + ++L+++ +lsPk++++veq+++hn++ Fl rf+eal+y
Manes.13G013600.1.p 296 LNFEFLW-VESTLENLKPEHFKLLAGEVVIINSILQLHCVVKESRGALN---SFLQILHELSPKLLILVEQDSNHNGPFFLGRFMEALHY 381
*******.7********************************88877777...8************************************* PP
GRAS 264 ysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve 352
ysa+fdsl+a lp+ + r+k+E++++++ei+n+++ceg +r+erhe+l +Wr+r+++aGF+p p+++ +qak l+k + +gy v
Manes.13G013600.1.p 382 YSAIFDSLDAMLPKYDTRRAKIEQFFFAEEIKNIISCEGPARVERHERLDQWRRRMSRAGFQPSPIKT--IMQAKQWLEKANfCEGYAVT 469
*****************************************************************975..78**********9******* PP
GRAS 353 eesgslvlgWkdrpLvsvSaWr 374
ee+ +lvlgWk++p++++S+W+
Manes.13G013600.1.p 470 EEKSCLVLGWKSKPIIAASCWK 491
*********************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 494 aa
Download sequence Send
to blast |
MSPVPYMQSE FCSDNKSYET TFLDLSPFCS VPNFSAVEND SPAWFDLDET RSHKRIKQEP 60 CSRTRANSLN SVPKLHFRDY IWAYTERYLA IEAMEEAAAA MTVGERNEVK DEEGSDGMKL 120 VQQLIACAEA VACRDKKHAS ALLAELRANA LVFGTSFQRV ASCFVQGLSD RLALLQPLGT 180 VGVLAPQANS VNTFKAEKDE ALRLVYDICP QIQFGHFVAN ASILEAFEGE SSVHIVDLGM 240 TFGLPHGLQW LNLIHSLAKH PGQQPHRLRI TGVGNSAELL QAIGDELDCY ARSLGLNFEF 300 LWVESTLENL KPEHFKLLAG EVVIINSILQ LHCVVKESRG ALNSFLQILH ELSPKLLILV 360 EQDSNHNGPF FLGRFMEALH YYSAIFDSLD AMLPKYDTRR AKIEQFFFAE EIKNIISCEG 420 PARVERHERL DQWRRRMSRA GFQPSPIKTI MQAKQWLEKA NFCEGYAVTE EKSCLVLGWK 480 SKPIIAASCW KCP*
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