PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.12G124100.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family Dof
Protein Properties Length: 343aa    MW: 36232 Da    PI: 8.5622
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.12G124100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof127.44.2e-403191262
               zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                         +e+alkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk++
  Manes.12G124100.1.p 31 QEQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKMK 91
                         5799******************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-262889IPR003851Zinc finger, Dof-type
PfamPF027012.2E-333389IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.4323589IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103773IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010052Biological Processguard cell differentiation
GO:0010118Biological Processstomatal movement
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1902066Biological Processregulation of cell wall pectin metabolic process
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MMSSSTLQGK QAAKEENQSS GNRKTAASRP QEQALKCPRC DSPNTKFCYY NNYSLTQPRH  60
FCKTCRRYWT KGGALRNVPI GGGCRKNKKM KSSSRLSGDS KDSSGSSEIG GFKFFHGLSP  120
AMDFNLGGLS FPRLNPSPSG LYNQFSAFGD ISATSAAAAS VTSPCFSLDP SGSSAGSLMG  180
FNYPLPSVAT GFSGAIHQDV GGGSMNVHTS LASSIESLSS INQDLHWKLQ QQRLAMLFGG  240
EDQKDSVVSS VPIESQAQKP QPILFQNLEI SKPEISGVGN SSREGGNGGG GDTATEWFFG  300
NSVGQVTPTP AHSNSNCNDN TAAGNWNGVQ AWGDLHQYNG LP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.12G124100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021631276.10.0dof zinc finger protein DOF5.7-like
TrEMBLA0A2C9UVL10.0A0A2C9UVL1_MANES; Uncharacterized protein
STRINGcassava4.1_031816m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38543460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.19e-59Dof family protein