PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.12G117300.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 182aa    MW: 20876.4 Da    PI: 10.0527
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.12G117300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.89.6e-1372129562
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                          ++ rr+++NRe+ArrsR RK++ +e+L++ v +L  eN+aL ++l +   ++++++ e
  Manes.12G117300.1.p  72 RKRRRMISNRESARRSRIRKQKHLENLRNQVNQLRVENRALMNRLHSVLYHYQSVQRE 129
                          5789**************************************9999888888877766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.2E-1468139IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.12870140IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.03E-1172120No hitNo description
PfamPF001702.7E-1072129IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.9E-1072146No hitNo description
CDDcd147023.50E-1873124No hitNo description
PROSITE patternPS0003607590IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MLSTVPAAFF SSPDSMLGNP FPFSSNGSTP GDCSELFLAT VDESKELNPN PVNNNFNSDD  60
PNPSIISVVD ERKRRRMISN RESARRSRIR KQKHLENLRN QVNQLRVENR ALMNRLHSVL  120
YHYQSVQREN DQLRSEYSVL RQNLSNIRQI LMLRQLQQFT SAWPCNNINT TEQTISPLVT  180
T*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17175RKRRR
27192RKRRRMISNRESARRSRIRKQK
38491RRSRIRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.12G117300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021631325.11e-130basic leucine zipper 4-like
TrEMBLA0A2C9UWY71e-128A0A2C9UWY7_MANES; Uncharacterized protein
STRINGcassava4.1_023777m1e-129(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.12e-23basic leucine-zipper 5