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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Manes.12G110800.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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| Family |
GRAS |
| Protein Properties |
Length: 459aa MW: 51097.5 Da PI: 5.6209 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.12G110800.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 297.3 | 3.9e-91 | 57 | 455 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalkl..fse 86
++lL++cA+a++s+d++laq++L+ l+++a pdgd++qRl+ f++AL ar a+ ++++k l++ ++++ + ++++++ +l f++
Manes.12G110800.1.p 57 EQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCAFLRALVARAAK--NGTCKLLAAMANANCTlaiNTHKFSVIELagFVD 144
79****************************************************..6666666666655544444555556666689*** PP
GRAS 87 vsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelg 173
++P+++f++ +aN aI ea++g + vHi+D++++ ++Q p+L++a+a+R e +p +++T+ g+ e ++ e+g +L +fA++ +
Manes.12G110800.1.p 145 LTPWHRFGFTAANAAIIEAIDGYSSVHIVDLSMTRCMQIPTLIDAIANRFEVTPLIKLTVAGATEDIppmLDLSYDELGAKLINFARSRN 234
***************************************************************7766987888999************** PP
GRAS 174 vpfefnvl...vakrledleleeLrvkp......gEalaVnlvlqlhrll...............desvsleserdevLklvkslsPkvv 239
v +ef+v+ +a+ +++l +e+Lrv++ gEal+Vn+++ lh+++ sv +s r+ +Lk ++sl P++v
Manes.12G110800.1.p 235 VIMEFRVVhssYADGFSSL-IEQLRVQNlvytenGEALVVNCQMLLHYIPeetisssiprtnssnPYSVVESSLRTMFLKSLWSLDPTIV 323
*******966633344444.66666666666669****************99999999999986533444444899************** PP
GRAS 240 vvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvpl 329
v+v+++ad+ s++++ r+ +a++y + +d++++ lpr s++r+++E+ + ++i+nv+a+eg +r+er et++ W +r+++a F+++++
Manes.12G110800.1.p 324 VLVDEDADLISNNLVCRLRSAFNYLWIPYDTMDTFLPRGSKQRQWYEAD-ICWKIENVIAHEGLQRVERLETKSMWVQRMKNANFRSISF 412
*************************************************.**************************************** PP
GRAS 330 sekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
+e+a++++k++l +++ g+ +++e++ lvl+Wk++++v+++aW
Manes.12G110800.1.p 413 GEDAVSEVKTMLGEHA-AGWGLKKEEDDLVLTWKGHNVVFATAW 455
****************.8999*********************** PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 459 aa
Download sequence Send
to blast |
MQFTETPPPP LQFHGQITAP ISNPTVNKIN QTQRTRPWPG FPTSKALGSL GDANCMEQLL 60
VHCANAIESN DATLAQQILW VLNNIAPPDG DSNQRLTCAF LRALVARAAK NGTCKLLAAM 120
ANANCTLAIN THKFSVIELA GFVDLTPWHR FGFTAANAAI IEAIDGYSSV HIVDLSMTRC 180
MQIPTLIDAI ANRFEVTPLI KLTVAGATED IPPMLDLSYD ELGAKLINFA RSRNVIMEFR 240
VVHSSYADGF SSLIEQLRVQ NLVYTENGEA LVVNCQMLLH YIPEETISSS IPRTNSSNPY 300
SVVESSLRTM FLKSLWSLDP TIVVLVDEDA DLISNNLVCR LRSAFNYLWI PYDTMDTFLP 360
RGSKQRQWYE ADICWKIENV IAHEGLQRVE RLETKSMWVQ RMKNANFRSI SFGEDAVSEV 420
KTMLGEHAAG WGLKKEEDDL VLTWKGHNVV FATAWMSA*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
