PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.12G096300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | Dof | ||||||||
Protein Properties | Length: 327aa MW: 34533.4 Da PI: 8.5441 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124.5 | 3.3e-39 | 60 | 118 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++ Manes.12G096300.1.p 60 SENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKST 118 57899***************************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02701 | 8.0E-33 | 62 | 117 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.516 | 63 | 117 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 8.0E-24 | 63 | 113 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 65 | 101 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence Send to blast |
MIHELLGGAG LIGGERKFSI NGTILEGTTS PSPSLSPSSS TTSASTTNTT ATATAANSSS 60 ENLRCPRCDS SNTKFCYYNN YNLTQPRHFC KTCRRYWTKG GALRNVPIGG GCRKNKSTTV 120 STSVGKSSTG KMKTVASEIG RSGFGNGFDH ELPSSPIMWA SPQNSHILTL LRATHNSNPN 180 SSTLSNSLAV KEEGCMIGTY LIGEPTVATG ALNARTLGLD PLAQVPSLGL CSPFWKNSQH 240 QAQQQQQTGF IACEAQNSGI QELYQRLRSS TNYYCDSSTV PLGNLASSST AASTILESSP 300 VAGGELGYWN PTFSWSDLPT TNGAYP* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.12G096300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021629816.1 | 0.0 | dof zinc finger protein DOF1.1-like | ||||
TrEMBL | A0A2C9UV74 | 0.0 | A0A2C9UV74_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_031319m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7219 | 32 | 47 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07640.1 | 8e-31 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.12G096300.1.p |