PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Manes.12G092900.1.p

Organism

Manihot esculenta

Taxonomic ID

3983

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot

Family

VOZ

Protein Properties

Length: 471aa MW: 52213.2 Da PI: 5.254

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Manes.12G092900.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	444	1.8e-136	206	422	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspw 90 ppp+af+gp+calwdctrpaqgsew++dycs+fhatlalneg+pg+tpvlrp+gi+lkd++lf+al+ak+qgk+vgip+cegaa++kspw Manes.12G092900.1.p 206 PPPAAFMGPQCALWDCTRPAQGSEWFADYCSNFHATLALNEGPPGMTPVLRPWGISLKDNSLFNALTAKKQGKNVGIPQCEGAASMKSPW 295 89************************************************************************************** PP VOZ 91 naaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldal 180 naaelfdl+ll+getirewlffdkprrafesg+rkqrslpdy+grgwhesrkqvmkefgg+krsyymdpqp++++ewhlyeye+n++d++ Manes.12G092900.1.p 296 NAAELFDLRLLDGETIREWLFFDKPRRAFESGSRKQRSLPDYRGRGWHESRKQVMKEFGGQKRSYYMDPQPPGCYEWHLYEYEVNNYDEC 385 ************************************************************************************** PP VOZ 181 alyrlelklvdekksakgkvskdsladlqkklgrlta 217 alyrle+klvdekk+++gkv+kdsladlqkk+g+lta Manes.12G092900.1.p 386 ALYRLEVKLVDEKKTPRGKVMKDSLADLQKKMGKLTA 422 *********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence Send to blast
MQKNAKSKCA SSSHHLFVDN AKNRLNDLQE RFSNLQAAIK DGRVSDVAIL EEQVYQSLRE 60 WKADLDAPSP ASSVLGGSLG TFSDDIGRLL KLCEEEDDAT SALAEQSVLK PEPTDQNLNI 120 GHFTAFEDGC LPNSDSQIHN FQGFDQSNSS ALALQDMVVS TSDMNTFLDC HHFILDEGFN 180 HGLSFGYTDG KELGKSAEMN NLPINPPPAA FMGPQCALWD CTRPAQGSEW FADYCSNFHA 240 TLALNEGPPG MTPVLRPWGI SLKDNSLFNA LTAKKQGKNV GIPQCEGAAS MKSPWNAAEL 300 FDLRLLDGET IREWLFFDKP RRAFESGSRK QRSLPDYRGR GWHESRKQVM KEFGGQKRSY 360 YMDPQPPGCY EWHLYEYEVN NYDECALYRL EVKLVDEKKT PRGKVMKDSL ADLQKKMGKL 420 TADTSDSSPS TKGRTKVDGK TKAEDVDSSE DHKTTGAGSV GCDSIQWSSK *

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence Send to blast

MQKNAKSKCA SSSHHLFVDN AKNRLNDLQE RFSNLQAAIK DGRVSDVAIL EEQVYQSLRE  60
WKADLDAPSP ASSVLGGSLG TFSDDIGRLL KLCEEEDDAT SALAEQSVLK PEPTDQNLNI  120
GHFTAFEDGC LPNSDSQIHN FQGFDQSNSS ALALQDMVVS TSDMNTFLDC HHFILDEGFN  180
HGLSFGYTDG KELGKSAEMN NLPINPPPAA FMGPQCALWD CTRPAQGSEW FADYCSNFHA  240
TLALNEGPPG MTPVLRPWGI SLKDNSLFNA LTAKKQGKNV GIPQCEGAAS MKSPWNAAEL  300
FDLRLLDGET IREWLFFDKP RRAFESGSRK QRSLPDYRGR GWHESRKQVM KEFGGQKRSY  360
YMDPQPPGCY EWHLYEYEVN NYDECALYRL EVKLVDEKKT PRGKVMKDSL ADLQKKMGKL  420
TADTSDSSPS TKGRTKVDGK TKAEDVDSSE DHKTTGAGSV GCDSIQWSSK *

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Manes.12G092900.1.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021631308.1	0.0	transcription factor VOZ1-like
Refseq	XP_021631309.1	0.0	transcription factor VOZ1-like
Swissprot	Q9SGQ0	1e-171	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A251JN44	0.0	A0A251JN44_MANES; Uncharacterized protein
STRING	cassava4.1_030824m	0.0	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-173	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	Manes.12G092900.1.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]