PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.12G035600.3.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family G2-like
Protein Properties Length: 491aa    MW: 53652.6 Da    PI: 5.2358
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.12G035600.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like109.61.6e-34264318155
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+
  Manes.12G035600.3.p 264 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVDGLTIYHVKSHLQKYRT 318
                          79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.495261321IPR017930Myb domain
SuperFamilySSF466892.15E-18262318IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.6E-32263320IPR009057Homeodomain-like
TIGRFAMsTIGR015576.0E-25264318IPR006447Myb domain, plants
PfamPF002494.6E-10266317IPR001005SANT/Myb domain
PfamPF143798.5E-26349396IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0016036Biological Processcellular response to phosphate starvation
GO:0055063Biological Processsulfate ion homeostasis
GO:0071486Biological Processcellular response to high light intensity
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    Send to blast
MEARPALSIQ RSGAKQISNH GLSAALSSSL PVLPTSIEET CPKLSNSQQV SLEGGLMTKP  60
IAHASQLPSN SGVVGHLFSS SAGFLSDLQY SSVSPQEKQS GNAPFISQSS INVTALTLPQ  120
SSHSGLLQST KSSQYAKETN ASWCPESMPG FLDLPVNNPV QNNQVESNSC SGVIVSEEFS  180
KRNDWQEWAD QLITDDDALT SNWSELLIDT SVVEVEQKMA YQVSKPSSNV LSQQPQVHQQ  240
LPAPSGEIHP VLTPTSSTNN VPSKPRMRWT PELHEAFVEA VNQLGGSERA TPKGVLKLMK  300
VDGLTIYHVK SHLQKYRTAR YRPDSSEGSS EKKFTPREEI SSLDLKTGIE ITEALRLQME  360
VQKRLHEQLE IQRNLQLRIE EQGRYLQMMF EKQCKSGSDK LTASSSAMEN TSAISSDAIH  420
DSPAKNEMEA SQLDHDKTNC NPLDAKSMVE EGSHDPSEKQ KAPEVDGSEN PQPDNCESSS  480
PSAKRQRTDA *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-32264322260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-32264322260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-32264322260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-32264322260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-32264322260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-32264322260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-32264322260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-32264322260Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.12G035600.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021631042.10.0protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1
RefseqXP_021631043.10.0protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1
TrEMBLA0A251K2790.0A0A251K279_MANES; Uncharacterized protein
STRINGcassava4.1_006374m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.11e-109phosphate starvation response 1