PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.12G035600.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | G2-like | ||||||||
Protein Properties | Length: 491aa MW: 53652.6 Da PI: 5.2358 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 109.6 | 1.6e-34 | 264 | 318 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+ Manes.12G035600.1.p 264 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVDGLTIYHVKSHLQKYRT 318 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 13.495 | 261 | 321 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 2.15E-18 | 262 | 318 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 5.6E-32 | 263 | 320 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 6.0E-25 | 264 | 318 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 4.6E-10 | 266 | 317 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 8.5E-26 | 349 | 396 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0007623 | Biological Process | circadian rhythm | ||||
GO:0016036 | Biological Process | cellular response to phosphate starvation | ||||
GO:0055063 | Biological Process | sulfate ion homeostasis | ||||
GO:0071486 | Biological Process | cellular response to high light intensity | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 491 aa Download sequence Send to blast |
MEARPALSIQ RSGAKQISNH GLSAALSSSL PVLPTSIEET CPKLSNSQQV SLEGGLMTKP 60 IAHASQLPSN SGVVGHLFSS SAGFLSDLQY SSVSPQEKQS GNAPFISQSS INVTALTLPQ 120 SSHSGLLQST KSSQYAKETN ASWCPESMPG FLDLPVNNPV QNNQVESNSC SGVIVSEEFS 180 KRNDWQEWAD QLITDDDALT SNWSELLIDT SVVEVEQKMA YQVSKPSSNV LSQQPQVHQQ 240 LPAPSGEIHP VLTPTSSTNN VPSKPRMRWT PELHEAFVEA VNQLGGSERA TPKGVLKLMK 300 VDGLTIYHVK SHLQKYRTAR YRPDSSEGSS EKKFTPREEI SSLDLKTGIE ITEALRLQME 360 VQKRLHEQLE IQRNLQLRIE EQGRYLQMMF EKQCKSGSDK LTASSSAMEN TSAISSDAIH 420 DSPAKNEMEA SQLDHDKTNC NPLDAKSMVE EGSHDPSEKQ KAPEVDGSEN PQPDNCESSS 480 PSAKRQRTDA * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 4e-32 | 264 | 322 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 4e-32 | 264 | 322 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 4e-32 | 264 | 322 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 4e-32 | 264 | 322 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 4e-32 | 264 | 322 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 4e-32 | 264 | 322 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 4e-32 | 264 | 322 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 4e-32 | 264 | 322 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.12G035600.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021631042.1 | 0.0 | protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1 | ||||
Refseq | XP_021631043.1 | 0.0 | protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1 | ||||
TrEMBL | A0A251K279 | 0.0 | A0A251K279_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_006374m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1512 | 34 | 98 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28610.1 | 1e-109 | phosphate starvation response 1 |
Link Out ? help Back to Top | |
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Phytozome | Manes.12G035600.1.p |