PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Manes.11G085000.1.p

Organism

Manihot esculenta

Taxonomic ID

3983

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot

Family

bZIP

Protein Properties

Length: 155aa MW: 17481.4 Da PI: 5.9968

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Manes.11G085000.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	55	1.7e-17	30	88	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +r+++NRe+ArrsR RK++ ++ L+ v++L++eN++L+ ++ ++++ ++++++ Manes.11G085000.1.p 30 RKRKRMISNRESARRSRMRKQKHLDDLTAQVAQLSKENHQLITSIDITTQHYLNVEADN 88 6789******************************************9999998887776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	6.4E-13	26	75	No hit	No description
SMART	SM00338	7.5E-21	26	90	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.657	28	75	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	5.3E-14	30	81	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.0E-13	30	82	No hit	No description
CDD	cd14702	3.00E-20	31	81	No hit	No description
PROSITE pattern	PS00036	0	33	48	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence Send to blast
MASSSGTSSG STSMHNSGSE ENFQALMDQR KRKRMISNRE SARRSRMRKQ KHLDDLTAQV 60 AQLSKENHQL ITSIDITTQH YLNVEADNSI LRAQVLELSH RLESLNEIIN FLTASNDVYE 120 DSSTLNEPSD CFFNPMNLSY LNQSVMASAD IFQY*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	29	50	RKRKRMISNRESARRSRMRKQK
2	42	49	RRSRMRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269\|PubMed:23461773}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Manes.11G085000.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021628974.1	1e-110	bZIP transcription factor 11-like
Swissprot	C0Z2L5	5e-52	BZP44_ARATH; bZIP transcription factor 44
TrEMBL	A0A2C9UZL1	1e-109	A0A2C9UZL1_MANES; Uncharacterized protein
STRING	cassava4.1_033849m	1e-109	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF613	34	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	3e-51	basic leucine-zipper 44

Link Out ? help Back to Top
Phytozome	Manes.11G085000.1.p

Publications ? help Back to Top
Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Pedrotti L, et al. Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness. Plant Cell, 2018. 30(2): p. 495-509 [PMID:29348240]