PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.11G084700.7.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family MYB_related
Protein Properties Length: 1127aa    MW: 123014 Da    PI: 4.4479
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.11G084700.7.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.73.7e-109821023346
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding    3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46  
                           rW++++ el++++++q+G++  + I + ++ gRt+ q+k+++ k
  Manes.11G084700.7.p  982 RWSKQDTELFYEGIRQFGTD-LSMIQQLFP-GRTRHQIKLKYKK 1023
                           9*******************.*********.***********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF159631.7E-289731057No hitNo description
PROSITE profilePS512939.8469781026IPR017884SANT domain
SMARTSM007171.4E-79791027IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.2E-59801023IPR009057Homeodomain-like
CDDcd001671.40E-69821023No hitNo description
SuperFamilySSF466895.53E-109821029IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1127 aa     Download sequence    Send to blast
MDSDLDSFDD ILLEPAVAHA ARAAGKFQPR AKPRARKITS TSLPSVLPSN TREKSDSSFP  60
TTLDTTKPVQ SVNPLDDRLI SPVDSSLVLP SIVLGSEELL ENNKNNLKCE PLNSSTQTVG  120
RREDLASPDS LPSEFVVTDS SNNGYSNFLF IEAGSSRLDL DPVDVVVPDT TSSKDVTGNG  180
SKVPVSLSMT TLDVAGEPWK DNDRLSPHEK GSSVTSNLSP ARAENAGSVA ASLDGNGELN  240
SSLLKSVEDV DSLGFDLDQP DIMFPECHAS DSRAGKKFQP KVRSHRRKEI SGSSMEQPAT  300
VAAVNSHTTQ PVESVLTMDK PVDPVCPSSP NLDNESNEPS KENEVLLPHD NNLELVSPSS  360
KEFMPKGDMS SKEAYLAGLD SNFGQKPSGV ADSPIEVNSL GLDLDPFADI VLPPAISNAR  420
AGGKFQPRGK ARPRKVTSES NSFAVSGATV EGPASVVSTV SDNLQSAKFI DVGDGRLMDS  480
VYSTLTTMKS MESKEALRND DCTNSGVLLF KVDRSSGLEN SSHLVASDAL HIGDIDRDPH  540
SGLGKSIGEN ADIFSGLEYI HDFVTQSPRT EIPLPASSDG TEEHSRFPAQ ISVNSSAPGA  600
CNEATENVVT CNEAAVEIDN GKPQSDEPGS FPDFESPGIL SESAIALECC TRNTQPKSMV  660
QNGKEIPSTS ILPDASPPNT QIDPSESVYI DVGSIPTFPS EDVLDYSSIS FGNFIPADPT  720
RSEFPVNEER TNLAETSCSS DLNILHHEDV STVPAKESSK DRKRKSSSAS YLAQNESVKS  780
ARQLRKRTIA SQVVDGPEDE AQDSDGFPSE HRNSSIADGD IDYDYRVDED NDNEDKVENT  840
SSSRRASKKS KKPMAEQEKK PVSRRKRKND APEQPNQQSR KKFSHSTRRK SRLKDLLSIP  900
EDEIDYQKMP FKDIILLAGY KEDLAIKEAK ASKNSTKKST NSLHGEEEDD TVTSEQDGGV  960
ADDQSNSLFN CHSFMDKTPT ARWSKQDTEL FYEGIRQFGT DLSMIQQLFP GRTRHQIKLK  1020
YKKEERQHPL RLSEALSNRA KDHSYFEKVM EQLQQVAAQE ERESNRGNSV SLTDDEEAQL  1080
NPETNEEVAK SDEQDEDVTV DQDGDPLKYD EDDDDFDIWG SYKSEY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.11G084700.7.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021628026.10.0uncharacterized protein LOC110626433
TrEMBLA0A2C9V0S50.0A0A2C9V0S5_MANES; Uncharacterized protein
STRINGcassava4.1_000789m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.16e-40MYB_related family protein