PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.11G007100.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 464aa    MW: 51074.9 Da    PI: 6.4242
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.11G007100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.91.3e-09178218545
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                          k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Manes.11G007100.1.p 178 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 218
                          7889************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-7170221No hitNo description
SMARTSM003381.5E-6174237IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415176220IPR004827Basic-leucine zipper domain
CDDcd147082.09E-21178230No hitNo description
SuperFamilySSF579596.88E-7178221No hitNo description
PfamPF001709.7E-7178218IPR004827Basic-leucine zipper domain
PROSITE patternPS000360181196IPR004827Basic-leucine zipper domain
PfamPF141443.2E-33260335IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    Send to blast
MGSRVGVEDD KEANGMPSFD SQLPISTTPG IEGSTGHAFR VSDFGAFEQS VAFRLEDAVN  60
LSTSTVFNSA KASNQAVSSD PLRIGTFDKS TASFNINRSA AQVELQRLPL EKNQQLNLVP  120
ISTGNTENWG DSNMADGSPR TDISTDDTDD KNQGFDRGQS AIGASDSSDR SKDKLDQKTL  180
RRLAQNREAA RKSRLRKKAY VQQLESSRLK LTQLEQELQR ARQQGIFISS SSDQAHSMSG  240
NGAMAFDVEY ARWLEEQNRQ INELRSAVNS HAGDAELRII IDGIMAHYDE IFRLKSNAAK  300
ADVFHLLSGM WKTPAERCFL WLGGFRSSEL LKLLVNQLEP LTEQQLVGIS NLQQSSQQAE  360
DALSQGMEAL QQSLAETLSS GSLGSSSSSG NVANYMGQMA MAMGKLGTLE GFIRQADNLR  420
QQTLQQMHRI LTTRQSARAL LAIHDYFSRL RALSSLWLAR PRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.11G007100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021627324.10.0transcription factor TGA6-like isoform X2
SwissprotQ6IVC20.0TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A251K7720.0A0A251K772_MANES; Uncharacterized protein
STRINGXP_002513027.10.0(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-160TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]