PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.10G123800.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | bZIP | ||||||||
Protein Properties | Length: 380aa MW: 42636.8 Da PI: 7.988 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 23.1 | 1.6e-07 | 246 | 292 | 17 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i+eLe+ v++L+ae ++ e+e ++++ l +e+ Manes.10G123800.1.p 246 AQRSRVRKLQYIAELERNVQALQAEGSEVSAEVEFINQQNLILSMEN 292 89****************************99999999887777766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.7E-4 | 235 | 294 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.25E-14 | 237 | 285 | No hit | No description |
SuperFamily | SSF57959 | 1.18E-5 | 246 | 288 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.9E-6 | 246 | 288 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence Send to blast |
MANSKDSSNV RNFMYSGKHA LLPPKIPFPS VTPSYVDYVP SGVIGSKAVQ RPRDGNSHHQ 60 RTSSETLLIE EQPSWLDDLL NEPETPVRRG GHRRSSSDSF AYVDVANASN MDYAAQDEYR 120 YKNMMSIPSW ASQDFDFYKD ARQASQSLYA DINMTKQKNR AWDSSLNVAT RTSGLPSGRE 180 ITVSQSLGSS GAPQEADGVP TSVHEKQDSA ESGQHDSRNS SEKKDNSHAK SSASETDTKR 240 AKQQFAQRSR VRKLQYIAEL ERNVQALQAE GSEVSAEVEF INQQNLILSM ENKALKQRLE 300 SLAQEQIIKY LEHEVLEREI GRLRTLYQQQ QQQPQTQQQS SSSHRRTNSR ELESQFSNLS 360 LKHKDANSGR DPVTGPVRT* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.10G123800.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021626095.1 | 0.0 | uncharacterized protein At4g06598-like | ||||
Refseq | XP_021626096.1 | 0.0 | uncharacterized protein At4g06598-like | ||||
Refseq | XP_021626097.1 | 0.0 | uncharacterized protein At4g06598-like | ||||
Swissprot | Q8W3M7 | 4e-73 | Y4598_ARATH; Uncharacterized protein At4g06598 | ||||
TrEMBL | A0A2C9V6W2 | 0.0 | A0A2C9V6W2_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_009724m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5123 | 26 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 1e-117 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.10G123800.1.p |
Publications ? help Back to Top | |||
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