PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.10G123800.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bZIP
Protein Properties Length: 380aa    MW: 42636.8 Da    PI: 7.988
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.10G123800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.11.6e-072462921763
                          HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          A+rsR RK+++i+eLe+ v++L+ae ++   e+e ++++   l +e+
  Manes.10G123800.1.p 246 AQRSRVRKLQYIAELERNVQALQAEGSEVSAEVEFINQQNLILSMEN 292
                          89****************************99999999887777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.7E-4235294IPR004827Basic-leucine zipper domain
CDDcd147031.25E-14237285No hitNo description
SuperFamilySSF579591.18E-5246288No hitNo description
Gene3DG3DSA:1.20.5.1701.9E-6246288No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MANSKDSSNV RNFMYSGKHA LLPPKIPFPS VTPSYVDYVP SGVIGSKAVQ RPRDGNSHHQ  60
RTSSETLLIE EQPSWLDDLL NEPETPVRRG GHRRSSSDSF AYVDVANASN MDYAAQDEYR  120
YKNMMSIPSW ASQDFDFYKD ARQASQSLYA DINMTKQKNR AWDSSLNVAT RTSGLPSGRE  180
ITVSQSLGSS GAPQEADGVP TSVHEKQDSA ESGQHDSRNS SEKKDNSHAK SSASETDTKR  240
AKQQFAQRSR VRKLQYIAEL ERNVQALQAE GSEVSAEVEF INQQNLILSM ENKALKQRLE  300
SLAQEQIIKY LEHEVLEREI GRLRTLYQQQ QQQPQTQQQS SSSHRRTNSR ELESQFSNLS  360
LKHKDANSGR DPVTGPVRT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.10G123800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021626095.10.0uncharacterized protein At4g06598-like
RefseqXP_021626096.10.0uncharacterized protein At4g06598-like
RefseqXP_021626097.10.0uncharacterized protein At4g06598-like
SwissprotQ8W3M74e-73Y4598_ARATH; Uncharacterized protein At4g06598
TrEMBLA0A2C9V6W20.0A0A2C9V6W2_MANES; Uncharacterized protein
STRINGcassava4.1_009724m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51232637
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.21e-117bZIP family protein
Publications ? help Back to Top
  1. Kumekawa N,Hosouchi T,Tsuruoka H,Kotani H
    The size and sequence organization of the centromeric region of Arabidopsis thaliana chromosome 4.
    DNA Res., 2001. 8(6): p. 285-90
    [PMID:11853315]