PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.09G187700.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | Trihelix | ||||||||
Protein Properties | Length: 354aa MW: 38631.2 Da PI: 5.3757 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 88.8 | 6.1e-28 | 43 | 137 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 rWt+qe+l+Li++++ e+r+rrg+ + +p+W++vs++++++g++r+p+qC+++w+nl+++ykkike+e+ ++e++s +++ Manes.09G187700.1.p 43 RWTRQEILVLIQGKKVAENRVRRGRtvgmafgsvQVEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDYKKIKEWESHIRDETESFWAM 132 8**********************98888889999*********************************************99999999999 PP trihelix 82 fdqle 86 ++l+ Manes.09G187700.1.p 133 RNDLR 137 99986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 2.6E-12 | 43 | 133 | No hit | No description |
PROSITE profile | PS50090 | 6.4 | 43 | 109 | IPR017877 | Myb-like domain |
Gene3D | G3DSA:1.10.10.60 | 6.8E-5 | 43 | 108 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 354 aa Download sequence Send to blast |
MVLEQQLNLG QNTIDGHPTN GVDIRPLSID GGDDGSKAPR LPRWTRQEIL VLIQGKKVAE 60 NRVRRGRTVG MAFGSVQVEP KWASVSSYCK RHGVNRGPVQ CRKRWSNLAG DYKKIKEWES 120 HIRDETESFW AMRNDLRREK KLPGFFDREV YDILDGVGDV SAVVPGLALA LAPSREPAED 180 VEAVFDSGRS AAAEDGLFSD FEQEEAGGSP EKEPTAAVSA AKEVPPIKAA AAAAGIAAPI 240 PLSEKQYHPA LEADEAQGTT NEKQPTSNPE GGSASHESRK RKRFTTDGDE EAINVQNQLI 300 DILEKNGKLL TAQLEVQNTN FQLEREQRKE HADGLVAVLN KLADALGKIA DKL* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.09G187700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021623243.1 | 0.0 | trihelix transcription factor ASR3-like | ||||
Swissprot | Q8VZ20 | 1e-126 | ASR3_ARATH; Trihelix transcription factor ASR3 | ||||
TrEMBL | A0A2C9VC18 | 0.0 | A0A2C9VC18_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_010729m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2165 | 33 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 1e-125 | Trihelix family protein |
Link Out ? help Back to Top | |
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Phytozome | Manes.09G187700.1.p |
Publications ? help Back to Top | |||
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