PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.09G109300.2.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family G2-like
Protein Properties Length: 368aa    MW: 41367.8 Da    PI: 8.7426
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.09G109300.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.17.3e-3263116255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          prlrWtpeLH +Fv+ave+LGG+e+AtPk +l+lm+v+gL+++hvkSHLQ+YR+
  Manes.09G109300.2.p  63 PRLRWTPELHLCFVKAVERLGGQERATPKLVLQLMNVNGLSIAHVKSHLQMYRS 116
                          8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.7E-3059117IPR009057Homeodomain-like
PROSITE profilePS5129414.25559119IPR017930Myb domain
SuperFamilySSF466896.27E-1561117IPR009057Homeodomain-like
TIGRFAMsTIGR015573.8E-2363118IPR006447Myb domain, plants
PfamPF002497.2E-1064115IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MEGSDKTGCS KTRACRQNQD ESESGENDED GNKVKNGGSS SNSTVEESEK KSSVRPYVRS  60
KMPRLRWTPE LHLCFVKAVE RLGGQERATP KLVLQLMNVN GLSIAHVKSH LQMYRSKKID  120
DPSQAMADHR HLVESGDRNI YNLSQLPMLQ GYNQRHGSSY RYGDASWNSR ESFVYNPHMG  180
RCLVDETRQG FYGTVAERIF GGNNTSNWTN CKLQTGASSF RSQFNWKAEE QLKAEQRRPS  240
QNPKFWQTQP SSSFTQLNPA AQVLNRSNIN IFSDMKSETN LQELKSLKRK ATDCNLDLDL  300
SLKLTPASDG SRRSLEESEV DSELSLSLYS PSSSKLSRLK GLGEDDYNNN SNNKEDAKRA  360
STLDLTI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A1e-1864118357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-1864118357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-1864118357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-1864118357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00297DAPTransfer from AT2G38300Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.09G109300.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021622642.10.0putative Myb family transcription factor At1g14600 isoform X2
TrEMBLA0A251K5N00.0A0A251K5N0_MANES; Uncharacterized protein
STRINGcassava4.1_026842m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.19e-60G2-like family protein